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Type 'q()' to quit R. > x <- c(100.44,100.47,100.49,100.52,100.47,100.48,100.48,100.53,100.62,100.89,100.97,101.01,101.02,100.92,100.93,100.98,101.07,101.1,101.11,101.19,101.31,101.52,101.61,101.65,101.66,101.56,101.75,101.83,101.98,102.06,102.07,102.1,102.42,102.91,103.14,103.23,103.23,102.91,103.11,103.14,103.26,103.3,103.32,103.44,103.54,103.98,104.24,104.29,104.29,103.98,103.98,103.89,103.86,103.88,103.88,104.31,104.41,104.8,104.89,104.9,104.9,104.54,104.67,104.87,105.04,105.09,105.1,105.46,105.83,106.27,106.46,106.52,106.53,105.96,106,106.15,106.32,106.41,106.41,106.81,106.99,107.35,107.53,107.56) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 100.44 101.02 101.66 103.23 104.29 104.90 106.53 [2,] 100.47 100.92 101.56 102.91 103.98 104.54 105.96 [3,] 100.49 100.93 101.75 103.11 103.98 104.67 106.00 [4,] 100.52 100.98 101.83 103.14 103.89 104.87 106.15 [5,] 100.47 101.07 101.98 103.26 103.86 105.04 106.32 [6,] 100.48 101.10 102.06 103.30 103.88 105.09 106.41 [7,] 100.48 101.11 102.07 103.32 103.88 105.10 106.41 [8,] 100.53 101.19 102.10 103.44 104.31 105.46 106.81 [9,] 100.62 101.31 102.42 103.54 104.41 105.83 106.99 [10,] 100.89 101.52 102.91 103.98 104.80 106.27 107.35 [11,] 100.97 101.61 103.14 104.24 104.89 106.46 107.53 [12,] 101.01 101.65 103.23 104.29 104.90 106.52 107.56 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 100.6142 101.2008 102.2258 103.4800 104.2558 105.3958 106.6683 > arr.sd [1] 0.2129216 0.2615151 0.5740202 0.4507771 0.4119015 0.7033874 0.5734082 > arr.range [1] 0.57 0.73 1.67 1.38 1.04 1.98 1.60 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -5.89976 0.06146 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -76.37 16.28 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -16.2289 0.1693 > postscript(file="/var/fisher/rcomp/tmp/1r27s1369340807.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/25jri1369340807.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3p6791369340807.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4uguc1369340807.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5s17u1369340807.tab") > > try(system("convert tmp/1r27s1369340807.ps tmp/1r27s1369340807.png",intern=TRUE)) character(0) > try(system("convert tmp/25jri1369340807.ps tmp/25jri1369340807.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.279 0.255 1.522