R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: i686-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(87.28 + ,87.28 + ,87.09 + ,86.92 + ,87.59 + ,90.72 + ,90.69 + ,90.3 + ,89.55 + ,88.94 + ,88.41 + ,87.82 + ,87.07 + ,86.82 + ,86.4 + ,86.02 + ,85.66 + ,85.32 + ,85 + ,84.67 + ,83.94 + ,82.83 + ,81.95 + ,81.19 + ,80.48 + ,78.86 + ,69.47 + ,68.77 + ,70.06 + ,73.95 + ,75.8 + ,77.79 + ,81.57 + ,83.07 + ,84.34 + ,85.1 + ,85.25 + ,84.26 + ,83.63 + ,86.44 + ,85.3 + ,84.1 + ,83.36 + ,82.48 + ,81.58 + ,80.47 + ,79.34 + ,82.13 + ,81.69 + ,80.7 + ,79.88 + ,79.16 + ,78.38 + ,77.42 + ,76.47 + ,75.46 + ,74.48 + ,78.27 + ,80.7 + ,79.91 + ,78.75 + ,77.78 + ,81.14 + ,81.08 + ,80.03 + ,78.91 + ,78.01 + ,76.9 + ,75.97 + ,81.93 + ,80.27 + ,78.67 + ,77.42 + ,76.16 + ,74.7 + ,76.39 + ,76.04 + ,74.65 + ,73.29 + ,71.79 + ,74.39 + ,74.91 + ,74.54 + ,73.08 + ,72.75 + ,71.32 + ,70.38 + ,70.35 + ,70.01 + ,69.36 + ,67.77 + ,69.26 + ,69.8 + ,68.38 + ,67.62 + ,68.39 + ,66.95 + ,65.21 + ,66.64 + ,63.45 + ,60.66 + ,62.34 + ,60.32 + ,58.64 + ,60.46 + ,58.59 + ,61.87 + ,61.85 + ,67.44 + ,77.06 + ,91.74 + ,93.15 + ,94.15 + ,93.11 + ,91.51 + ,89.96 + ,88.16 + ,86.98 + ,88.03 + ,86.24 + ,84.65 + ,83.23 + ,81.7 + ,80.25 + ,78.8 + ,77.51 + ,76.2 + ,75.04 + ,74 + ,75.49 + ,77.14 + ,76.15 + ,76.27 + ,78.19 + ,76.49 + ,77.31 + ,76.65 + ,74.99 + ,73.51 + ,72.07 + ,70.59 + ,71.96 + ,76.29 + ,74.86 + ,74.93 + ,71.9 + ,71.01 + ,77.47 + ,75.78 + ,76.6 + ,76.07 + ,74.57 + ,73.02 + ,72.65 + ,73.16 + ,71.53 + ,69.78 + ,67.98 + ,69.96 + ,72.16 + ,70.47 + ,68.86 + ,67.37 + ,65.87 + ,72.16 + ,71.34 + ,69.93 + ,68.44 + ,67.16 + ,66.01 + ,67.25 + ,70.91 + ,69.75 + ,68.59 + ,67.48 + ,66.31 + ,64.81 + ,66.58 + ,65.97 + ,64.7 + ,64.7 + ,60.94 + ,59.08 + ,58.42 + ,57.77 + ,57.11 + ,53.31 + ,49.96 + ,49.4 + ,48.84 + ,48.3 + ,47.74 + ,47.24 + ,46.76 + ,46.29 + ,48.9 + ,49.23 + ,48.53 + ,48.03 + ,54.34 + ,53.79 + ,53.24 + ,52.96 + ,52.17 + ,51.7 + ,58.55 + ,78.2 + ,77.03 + ,76.19 + ,77.15 + ,75.87 + ,95.47 + ,109.67 + ,112.28 + ,112.01 + ,107.93 + ,105.96 + ,105.06 + ,102.98 + ,102.2 + ,105.23 + ,101.85 + ,99.89 + ,96.23 + ,94.76 + ,91.51 + ,91.63 + ,91.54 + ,85.23 + ,87.83 + ,87.38 + ,84.44 + ,85.19 + ,84.03 + ,86.73 + ,102.52 + ,104.45 + ,106.98 + ,107.02 + ,99.26 + ,94.45 + ,113.44 + ,157.33 + ,147.38 + ,171.89 + ,171.95 + ,132.71 + ,126.02 + ,121.18 + ,115.45 + ,110.48 + ,117.85 + ,117.63 + ,124.65 + ,109.59 + ,111.27 + ,99.78 + ,98.21 + ,99.2 + ,97.97 + ,89.55 + ,87.91 + ,93.34 + ,94.42 + ,93.2 + ,90.29 + ,91.46 + ,89.98 + ,88.35 + ,88.41 + ,82.44 + ,79.89 + ,75.69 + ,75.66 + ,84.5 + ,96.73 + ,87.48 + ,82.39 + ,83.48 + ,79.31 + ,78.16 + ,72.77 + ,72.45 + ,68.46 + ,67.62 + ,68.76 + ,70.07 + ,68.55 + ,65.3 + ,58.96 + ,59.17 + ,62.37 + ,66.28 + ,55.62 + ,55.23 + ,55.85 + ,56.75 + ,50.89 + ,53.88 + ,52.95 + ,55.08 + ,53.61 + ,58.78 + ,61.85 + ,55.91 + ,53.32 + ,46.41 + ,44.57 + ,50 + ,50 + ,53.36 + ,46.23 + ,50.45 + ,49.07 + ,45.85 + ,48.45 + ,49.96 + ,46.53 + ,50.51 + ,47.58 + ,48.05 + ,46.84 + ,47.67 + ,49.16 + ,55.54 + ,55.82 + ,58.22 + ,56.19 + ,57.77 + ,63.19 + ,54.76 + ,55.74 + ,62.54 + ,61.39 + ,69.6 + ,79.23 + ,80 + ,93.68 + ,107.63 + ,100.18 + ,97.3 + ,90.45 + ,80.64 + ,80.58 + ,75.82 + ,85.59 + ,89.35 + ,89.42 + ,104.73 + ,95.32 + ,89.27 + ,90.44 + ,86.97 + ,79.98 + ,81.22 + ,87.35 + ,83.64 + ,82.22 + ,94.4 + ,102.18) > par3 = '512' > par2 = 'no' > par1 = '0' > ylab = 'Density' > xlab = 'Value' > par3 <- '512' > par2 <- 'no' > par1 <- '0' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa, P. (2012), Kernel Density Estimation (v1.0.11) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_density.wasp/ > #Source of accompanying publication: http://www.xycoon.com/density_trace.htm > # > if (par1 == '0') bw <- 'nrd0' > if (par1 != '0') bw <- as.numeric(par1) > par3 <- as.numeric(par3) > mydensity <- array(NA, dim=c(par3,8)) > postscript(file="/var/wessaorg/rcomp/tmp/1vikz1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity1<-density(x,bw=bw,kernel='gaussian',na.rm=TRUE) > mydensity[,8] = signif(mydensity1$x,3) > mydensity[,1] = signif(mydensity1$y,3) > plot(mydensity1,main='Gaussian Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > mydensity1 Call: density.default(x = x, bw = bw, kernel = "gaussian", na.rm = TRUE) Data: x (360 obs.); Bandwidth 'bw' = 4.166 x y Min. : 32.07 Min. :5.894e-06 1st Qu.: 70.17 1st Qu.:2.756e-04 Median :108.26 Median :1.847e-03 Mean :108.26 Mean :6.556e-03 3rd Qu.:146.35 3rd Qu.:1.140e-02 Max. :184.45 Max. :2.650e-02 > postscript(file="/var/wessaorg/rcomp/tmp/2xabz1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity2<-density(x,bw=bw,kernel='epanechnikov',na.rm=TRUE) > mydensity[,2] = signif(mydensity2$y,3) > plot(mydensity2,main='Epanechnikov Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/3n0nc1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity3<-density(x,bw=bw,kernel='rectangular',na.rm=TRUE) > mydensity[,3] = signif(mydensity3$y,3) > plot(mydensity3,main='Rectangular Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/4zb7l1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity4<-density(x,bw=bw,kernel='triangular',na.rm=TRUE) > mydensity[,4] = signif(mydensity4$y,3) > plot(mydensity4,main='Triangular Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/5mcqh1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity5<-density(x,bw=bw,kernel='biweight',na.rm=TRUE) > mydensity[,5] = signif(mydensity5$y,3) > plot(mydensity5,main='Biweight Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/6opmo1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity6<-density(x,bw=bw,kernel='cosine',na.rm=TRUE) > mydensity[,6] = signif(mydensity6$y,3) > plot(mydensity6,main='Cosine Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/7lemk1384368563.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity7<-density(x,bw=bw,kernel='optcosine',na.rm=TRUE) > mydensity[,7] = signif(mydensity7$y,3) > plot(mydensity7,main='Optcosine Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Properties of Density Trace',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Bandwidth',header=TRUE) > a<-table.element(a,mydensity1$bw) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'#Observations',header=TRUE) > a<-table.element(a,mydensity1$n) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/8bjdy1384368563.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Maximum Density Values',3,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Kernel',1,TRUE) > a<-table.element(a,'x-value',1,TRUE) > a<-table.element(a,'max. density',1,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Gaussian',1,TRUE) > a<-table.element(a,mydensity1$x[mydensity1$y==max(mydensity1$y)],1) > a<-table.element(a,mydensity1$y[mydensity1$y==max(mydensity1$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Epanechnikov',1,TRUE) > a<-table.element(a,mydensity2$x[mydensity2$y==max(mydensity2$y)],1) > a<-table.element(a,mydensity2$y[mydensity2$y==max(mydensity2$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Rectangular',1,TRUE) > a<-table.element(a,mydensity3$x[mydensity3$y==max(mydensity3$y)],1) > a<-table.element(a,mydensity3$y[mydensity3$y==max(mydensity3$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Triangular',1,TRUE) > a<-table.element(a,mydensity4$x[mydensity4$y==max(mydensity4$y)],1) > a<-table.element(a,mydensity4$y[mydensity4$y==max(mydensity4$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Biweight',1,TRUE) > a<-table.element(a,mydensity5$x[mydensity5$y==max(mydensity5$y)],1) > a<-table.element(a,mydensity5$y[mydensity5$y==max(mydensity5$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Cosine',1,TRUE) > a<-table.element(a,mydensity6$x[mydensity6$y==max(mydensity6$y)],1) > a<-table.element(a,mydensity6$y[mydensity6$y==max(mydensity6$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Optcosine',1,TRUE) > a<-table.element(a,mydensity7$x[mydensity7$y==max(mydensity7$y)],1) > a<-table.element(a,mydensity7$y[mydensity7$y==max(mydensity7$y)],1) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/9vhpl1384368563.tab") > if (par2=='yes') { + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Kernel Density Values',8,TRUE) + a<-table.row.end(a) + a<-table.row.start(a) + a<-table.element(a,'x-value',1,TRUE) + a<-table.element(a,'Gaussian',1,TRUE) + a<-table.element(a,'Epanechnikov',1,TRUE) + a<-table.element(a,'Rectangular',1,TRUE) + a<-table.element(a,'Triangular',1,TRUE) + a<-table.element(a,'Biweight',1,TRUE) + a<-table.element(a,'Cosine',1,TRUE) + a<-table.element(a,'Optcosine',1,TRUE) + a<-table.row.end(a) + for(i in 1:par3) { + a<-table.row.start(a) + a<-table.element(a,mydensity[i,8],1,TRUE) + for(j in 1:7) { + a<-table.element(a,mydensity[i,j],1) + } + a<-table.row.end(a) + } + a<-table.end(a) + table.save(a,file="/var/wessaorg/rcomp/tmp/10tvdy1384368563.tab") + } > > try(system("convert tmp/1vikz1384368563.ps tmp/1vikz1384368563.png",intern=TRUE)) character(0) > try(system("convert tmp/2xabz1384368563.ps tmp/2xabz1384368563.png",intern=TRUE)) character(0) > try(system("convert tmp/3n0nc1384368563.ps tmp/3n0nc1384368563.png",intern=TRUE)) character(0) > try(system("convert tmp/4zb7l1384368563.ps tmp/4zb7l1384368563.png",intern=TRUE)) character(0) > try(system("convert tmp/5mcqh1384368563.ps tmp/5mcqh1384368563.png",intern=TRUE)) character(0) > try(system("convert tmp/6opmo1384368563.ps tmp/6opmo1384368563.png",intern=TRUE)) character(0) > try(system("convert tmp/7lemk1384368563.ps tmp/7lemk1384368563.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 3.762 0.902 4.656