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Type 'q()' to quit R. > x <- c(19.4,19.4,19.4,19.5,19.5,19.5,28.7,28.7,28.7,21.8,21.8,21.8,20,20,20,22.6,22.6,22.6,22.4,22.4,22.4,18.6,18.6,18.6,16.2,16.2,16.2,13.8,13.8,13.8,24.1,24.1,24.1,19.9,19.9,19.9,22.3,22.3,22.3,20.9,20.9,20.9,23.5,23.5,23.5,23.1,23.1,23.1,25.7,25.7,25.7,19.7,19.7,19.7,23.1,23.1,23.1,20.7,20.7,20.7,18,18,18,16.9,16.9,16.9,24.4,24.4,24.4,15.5,15.5,15.5,18.4,18.4,18.4,16.2,16.2,16.2,20.6,20.6,20.6,19.8,19.8,19.8) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 19.4 20.0 16.2 22.3 25.7 18.0 18.4 [2,] 19.4 20.0 16.2 22.3 25.7 18.0 18.4 [3,] 19.4 20.0 16.2 22.3 25.7 18.0 18.4 [4,] 19.5 22.6 13.8 20.9 19.7 16.9 16.2 [5,] 19.5 22.6 13.8 20.9 19.7 16.9 16.2 [6,] 19.5 22.6 13.8 20.9 19.7 16.9 16.2 [7,] 28.7 22.4 24.1 23.5 23.1 24.4 20.6 [8,] 28.7 22.4 24.1 23.5 23.1 24.4 20.6 [9,] 28.7 22.4 24.1 23.5 23.1 24.4 20.6 [10,] 21.8 18.6 19.9 23.1 20.7 15.5 19.8 [11,] 21.8 18.6 19.9 23.1 20.7 15.5 19.8 [12,] 21.8 18.6 19.9 23.1 20.7 15.5 19.8 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 22.35 20.90 18.50 22.45 22.30 18.70 18.75 > arr.sd [1] 3.958305 1.750844 4.068728 1.037917 2.422621 3.559622 1.743820 > arr.range [1] 9.3 4.0 10.3 2.6 6.0 8.9 4.4 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 6.9593 -0.2096 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 6.905 -1.999 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 18.8689 -0.6015 > postscript(file="/var/wessaorg/rcomp/tmp/1syir1385552225.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2h1im1385552225.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3v0vv1385552225.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4y4i01385552225.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5mg7i1385552225.tab") > > try(system("convert tmp/1syir1385552225.ps tmp/1syir1385552225.png",intern=TRUE)) character(0) > try(system("convert tmp/2h1im1385552225.ps tmp/2h1im1385552225.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.158 0.454 2.582