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Type 'q()' to quit R. > x <- c(16.3,16.37,16.38,16.37,16.42,16.43,16.44,16.53,16.55,16.56,16.6,16.61,16.62,16.64,16.61,16.74,16.87,16.89,16.89,16.99,17.06,17.1,17.11,17.17,17.17,17.21,17.37,17.43,17.44,17.46,17.42,17.47,17.45,17.44,17.46,17.47,17.47,17.56,17.61,17.61,17.6,17.57,17.59,17.59,17.68,17.73,17.75,17.75,17.75,17.85,18.06,18.05,18.16,18.2,18.21,18.33,18.36,18.37,18.4,18.47,18.49,18.5,18.53,18.56,18.6,18.61,18.62,18.61,18.65,18.77,18.78,18.78,18.8,18.85,18.85,18.98,19.06,19.08,19.19,19.21,19.29,19.3,19.36,19.36) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 16.30 16.62 17.17 17.47 17.75 18.49 18.80 [2,] 16.37 16.64 17.21 17.56 17.85 18.50 18.85 [3,] 16.38 16.61 17.37 17.61 18.06 18.53 18.85 [4,] 16.37 16.74 17.43 17.61 18.05 18.56 18.98 [5,] 16.42 16.87 17.44 17.60 18.16 18.60 19.06 [6,] 16.43 16.89 17.46 17.57 18.20 18.61 19.08 [7,] 16.44 16.89 17.42 17.59 18.21 18.62 19.19 [8,] 16.53 16.99 17.47 17.59 18.33 18.61 19.21 [9,] 16.55 17.06 17.45 17.68 18.36 18.65 19.29 [10,] 16.56 17.10 17.44 17.73 18.37 18.77 19.30 [11,] 16.60 17.11 17.46 17.75 18.40 18.78 19.36 [12,] 16.61 17.17 17.47 17.75 18.47 18.78 19.36 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 16.46333 16.89083 17.39917 17.62583 18.18417 18.62500 19.11083 > arr.sd [1] 0.10272057 0.20146998 0.10175356 0.08532913 0.22362543 0.10352865 0.20482624 > arr.range [1] 0.31 0.56 0.30 0.28 0.72 0.29 0.56 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -0.21200 0.02017 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -8.762 2.353 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -0.5239 0.0538 > postscript(file="/var/fisher/rcomp/tmp/1cdgs1385572432.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2v43n1385572432.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3essb1385572432.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/43xdv1385572432.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5myxr1385572432.tab") > > try(system("convert tmp/1cdgs1385572432.ps tmp/1cdgs1385572432.png",intern=TRUE)) character(0) > try(system("convert tmp/2v43n1385572432.ps tmp/2v43n1385572432.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.262 0.375 1.618