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Type 'q()' to quit R. > x <- c(1.2103,1.1938,1.202,1.2271,1.277,1.265,1.2684,1.2811,1.2727,1.2611,1.2881,1.3213,1.2999,1.3074,1.3242,1.3516,1.3511,1.3419,1.3716,1.3622,1.3896,1.4227,1.4684,1.457,1.4718,1.4748,1.5527,1.5751,1.5557,1.5553,1.577,1.4975,1.4369,1.3322,1.2732,1.3449,1.3239,1.2785,1.305,1.319,1.365,1.4016,1.4088,1.4268,1.4562,1.4816,1.4914,1.4614,1.4272,1.3686,1.3569,1.3406,1.2565,1.2209,1.277,1.2894,1.3067,1.3898,1.3661,1.322,1.336,1.3649,1.3999,1.4442,1.4349,1.4388,1.4264,1.4343,1.377,1.3706,1.3556,1.3179,1.2905,1.3224,1.3201,1.3162,1.2789,1.2526,1.2288,1.24,1.2856,1.2974,1.2828,1.3119) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 1.2103 1.2999 1.4718 1.3239 1.4272 1.3360 1.2905 [2,] 1.1938 1.3074 1.4748 1.2785 1.3686 1.3649 1.3224 [3,] 1.2020 1.3242 1.5527 1.3050 1.3569 1.3999 1.3201 [4,] 1.2271 1.3516 1.5751 1.3190 1.3406 1.4442 1.3162 [5,] 1.2770 1.3511 1.5557 1.3650 1.2565 1.4349 1.2789 [6,] 1.2650 1.3419 1.5553 1.4016 1.2209 1.4388 1.2526 [7,] 1.2684 1.3716 1.5770 1.4088 1.2770 1.4264 1.2288 [8,] 1.2811 1.3622 1.4975 1.4268 1.2894 1.4343 1.2400 [9,] 1.2727 1.3896 1.4369 1.4562 1.3067 1.3770 1.2856 [10,] 1.2611 1.4227 1.3322 1.4816 1.3898 1.3706 1.2974 [11,] 1.2881 1.4684 1.2732 1.4914 1.3661 1.3556 1.2828 [12,] 1.3213 1.4570 1.3449 1.4614 1.3220 1.3179 1.3119 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 1.255658 1.370633 1.470592 1.393267 1.326808 1.391708 1.285600 > arr.sd [1] 0.03886142 0.05467872 0.10409694 0.07358333 0.05946740 0.04385790 0.03130948 > arr.range [1] 0.1275 0.1685 0.3038 0.2129 0.2063 0.1263 0.0936 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -0.3277 0.2843 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -4.822 6.268 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -0.8404 0.7501 > postscript(file="/var/fisher/rcomp/tmp/1csxt1385578298.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2wgnv1385578298.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3ist91385578298.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/453b31385578298.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5zgp21385578298.tab") > > try(system("convert tmp/1csxt1385578298.ps tmp/1csxt1385578298.png",intern=TRUE)) character(0) > try(system("convert tmp/2wgnv1385578298.ps tmp/2wgnv1385578298.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.700 0.464 2.130