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Type 'q()' to quit R. > x <- c(4.69,4.69,4.69,4.69,4.69,4.69,4.69,4.73,4.78,4.79,4.79,4.8,4.8,4.81,5.16,5.26,5.29,5.29,5.29,5.3,5.3,5.3,5.3,5.3,5.3,5.3,5.3,5.35,5.44,5.47,5.47,5.48,5.48,5.48,5.48,5.48,5.48,5.48,5.5,5.55,5.57,5.58,5.58,5.58,5.59,5.59,5.59,5.55,5.61,5.61,5.61,5.63,5.69,5.7,5.7,5.7,5.7,5.7,5.7,5.7,5.7,5.7,5.7,5.71,5.74,5.77,5.79,5.79,5.8,5.8,5.8,5.8,5.8,5.81,5.81,5.83,5.94,5.98,5.99,6,6.02,6.02,6.02,6.02) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 4.69 4.80 5.30 5.48 5.61 5.70 5.80 [2,] 4.69 4.81 5.30 5.48 5.61 5.70 5.81 [3,] 4.69 5.16 5.30 5.50 5.61 5.70 5.81 [4,] 4.69 5.26 5.35 5.55 5.63 5.71 5.83 [5,] 4.69 5.29 5.44 5.57 5.69 5.74 5.94 [6,] 4.69 5.29 5.47 5.58 5.70 5.77 5.98 [7,] 4.69 5.29 5.47 5.58 5.70 5.79 5.99 [8,] 4.73 5.30 5.48 5.58 5.70 5.79 6.00 [9,] 4.78 5.30 5.48 5.59 5.70 5.80 6.02 [10,] 4.79 5.30 5.48 5.59 5.70 5.80 6.02 [11,] 4.79 5.30 5.48 5.59 5.70 5.80 6.02 [12,] 4.80 5.30 5.48 5.55 5.70 5.80 6.02 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 4.726667 5.200000 5.419167 5.553333 5.670833 5.758333 5.936667 > arr.sd [1] 0.04830459 0.18867962 0.08061788 0.04271115 0.04166061 0.04468747 0.09470848 > arr.range [1] 0.11 0.50 0.18 0.11 0.09 0.10 0.22 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.1894 -0.0205 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -1.5926 -0.6624 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 0.53713 -0.06402 > postscript(file="/var/fisher/rcomp/tmp/1j9h91385578343.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/26lio1385578343.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3cwz91385578343.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/41r2a1385578343.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5k86t1385578343.tab") > > try(system("convert tmp/1j9h91385578343.ps tmp/1j9h91385578343.png",intern=TRUE)) character(0) > try(system("convert tmp/26lio1385578343.ps tmp/26lio1385578343.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.675 0.499 2.143