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Type 'q()' to quit R. > x <- c(-2,0,1,-3,-3,-5,-7,-7,-5,-13,-16,-20,-18,-21,-20,-16,-14,-12,-10,-3,-4,-4,-1,-8,-10,-11,-7,-2,-6,-4,0,2,2,5,8,8,5,10,6,6,9,5,5,-4,-5,-1,-8,-8,-13,-18,-8,-8,-6,-5,-11,-14,-12,-13,-19,-21,-22,-13,-21,-17,-15,-14,-11,-8,-3,-2,-1,1) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 6 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 6 6 6 6 6 6 6 6 6 6 6 6 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] -2 -18 -10 5 -13 -22 NA [2,] 0 -21 -11 10 -18 -13 NA [3,] 1 -20 -7 6 -8 -21 NA [4,] -3 -16 -2 6 -8 -17 NA [5,] -3 -14 -6 9 -6 -15 NA [6,] -5 -12 -4 5 -5 -14 NA [7,] -7 -10 0 5 -11 -11 NA [8,] -7 -3 2 -4 -14 -8 NA [9,] -5 -4 2 -5 -12 -3 NA [10,] -13 -4 5 -1 -13 -2 NA [11,] -16 -1 8 -8 -19 -1 NA [12,] -20 -8 8 -8 -21 1 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/wessaorg/rcomp/tmp/12fwv1398674506.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2tizc1398674506.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/3u40s1398674506.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/4v9ip1398674506.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] -22.0 -21 -21.0 -17.0 -15 -14 -11.0 -14.0 -5.0 -13 -19.0 -21 [2,] -18.0 -18 -20.0 -16.0 -14 -12 -11.0 -8.0 -5.0 -13 -16.0 -20 [3,] -11.5 -12 -7.5 -5.5 -6 -5 -8.5 -5.5 -4.5 -3 -4.5 -8 [4,] -2.0 0 1.0 -2.0 -3 -4 0.0 -3.0 -3.0 -1 -1.0 1 [5,] 5.0 10 6.0 6.0 9 5 5.0 2.0 -3.0 5 8.0 8 $n [1] 6 6 6 6 6 6 6 6 6 6 6 6 $conf [,1] [,2] [,3] [,4] [,5] [,6] [1,] -21.820517 -23.6105814 -21.045678 -14.530452 -13.095355 -10.1602584 [2,] -1.179483 -0.3894186 6.045678 3.530452 1.095355 0.1602584 [,7] [,8] [,9] [,10] [,11] [,12] [1,] -15.595355 -8.725161 -5.790065 -10.740388 -14.175484 -21.545678 [2,] -1.404645 -2.274839 -3.209935 4.740388 5.175484 5.545678 $out [1] 2 -12 $group [1] 9 9 $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(-22, -18, -11.5, -2, 5, -21, -18, -12, 0, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/5yn9o1398674506.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] -20.0 -21 -11.0 -8.0 -21.0 -22.0 NA [2,] -10.0 -17 -6.5 -4.5 -16.0 -16.0 NA [3,] -5.0 -11 -1.0 5.0 -12.5 -12.0 NA [4,] -2.5 -4 3.5 6.0 -8.0 -2.5 NA [5,] 1.0 -1 8.0 10.0 -5.0 1.0 NA $n [1] 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] -8.4208 -16.929387 -5.561067 0.2108795 -16.148854 -18.157441 NA [2,] -1.5792 -5.070613 3.561067 9.7891205 -8.851146 -5.842559 NA $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" NA Warning message: In bxp(list(stats = c(-20, -10, -5, -2.5, 1, -21, -17, -11, -4, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/6dxmk1398674506.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 4.505552 14.0 1.750 [2,] 6.709395 17.0 7.125 [3,] 8.775625 23.5 10.625 [4,] 10.528521 27.0 13.500 [5,] 11.720353 31.0 16.000 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 7.033696 18.93893 7.71732 [2,] 10.517554 28.06107 13.53268 $out numeric(0) $group numeric(0) $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(4.50555213042752, 6.70939537907807, 8.77562501355232, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/12fwv1398674506.ps tmp/12fwv1398674506.png",intern=TRUE)) character(0) > try(system("convert tmp/2tizc1398674506.ps tmp/2tizc1398674506.png",intern=TRUE)) character(0) > try(system("convert tmp/3u40s1398674506.ps tmp/3u40s1398674506.png",intern=TRUE)) character(0) > try(system("convert tmp/4v9ip1398674506.ps tmp/4v9ip1398674506.png",intern=TRUE)) character(0) > try(system("convert tmp/5yn9o1398674506.ps tmp/5yn9o1398674506.png",intern=TRUE)) character(0) > try(system("convert tmp/6dxmk1398674506.ps tmp/6dxmk1398674506.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 4.222 0.745 4.993