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Type 'q()' to quit R. > x <- c(1220,1250,1350,1380,1310,1350,1360,1230,1330,1330,1380,1340,1220,1230,1400,1320,1320,1380,1340,1220,1310,1280,1330,1350,1240,1260,1340,1270,1330,1440,1350,1220,1310,1350,1300,1410,1260,1210,1410,1240,1360,1420,1310,1360,1260,1410,1330,1400,1240,1280,1460,1250,1340,1440,1170,1420,1250,1390,1260,1390,1290,1310,1540,1250,1320,1430,1080,1370,1290,1380,1260,1400,1250,1290,1550,1200,1320,1500,1060,1220,1260,1270,1280,1350,1320,1350,1530,1150,1270,1460,1000,1290,1330,1180,1350,1300,1350,1350,1540,1180,1280,1520,960,1420,1370,1210,1320,1260) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 108 > (np <- floor(n / par1)) [1] 9 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 1220 1220 1240 1260 1240 1290 1250 1320 1350 [2,] 1250 1230 1260 1210 1280 1310 1290 1350 1350 [3,] 1350 1400 1340 1410 1460 1540 1550 1530 1540 [4,] 1380 1320 1270 1240 1250 1250 1200 1150 1180 [5,] 1310 1320 1330 1360 1340 1320 1320 1270 1280 [6,] 1350 1380 1440 1420 1440 1430 1500 1460 1520 [7,] 1360 1340 1350 1310 1170 1080 1060 1000 960 [8,] 1230 1220 1220 1360 1420 1370 1220 1290 1420 [9,] 1330 1310 1310 1260 1250 1290 1260 1330 1370 [10,] 1330 1280 1350 1410 1390 1380 1270 1180 1210 [11,] 1380 1330 1300 1330 1260 1260 1280 1350 1320 [12,] 1340 1350 1410 1400 1390 1400 1350 1300 1260 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 1319.167 1308.333 1318.333 1330.833 1324.167 1326.667 1295.833 1294.167 [9] 1313.333 > arr.sd [1] 55.83390 59.97474 65.89707 74.03419 94.33580 113.00308 129.57682 [8] 138.92171 156.28257 > arr.range [1] 160 180 220 210 290 460 490 530 580 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 1875.533 -1.352 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 124.99 -16.77 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 8555.816 -6.245 > postscript(file="/var/wessaorg/rcomp/tmp/1ybx81408117644.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2pe6l1408117644.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3egw71408117644.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4aki21408117644.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/574yx1408117644.tab") > > try(system("convert tmp/1ybx81408117644.ps tmp/1ybx81408117644.png",intern=TRUE)) character(0) > try(system("convert tmp/2pe6l1408117644.ps tmp/2pe6l1408117644.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.902 0.165 1.072