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Type 'q()' to quit R. > x <- c(55.7,59.2,59.8,61.6,65.8,64.2,67,62.8,65.5,75.2,80.9,83.2,83.7,86.4,85.9,80.4,81.8,87.5,83.7,87,99.7,101.4,101.9,115.7,123.2,136.9,146.8,149.6,146.5,157,147.9,133.6,128.7,100.8,91.8,89.3,96.7,91.6,93.3,93.3,101,100.4,86.9,83.9,80.3,87.7,92.7,95.5,92,87.4,86.8,83.7,85,81.7,90.9,101.5,113.8,120.1,122.1,132.5,140,149.4,144.3,154.4,151.4,145.5,136.8,146.6,145.1,133.6,131.4,127.5,130.1,131.1,132.3,128.6,125.1,128.7,156.1,163.2,159.8,157.4,156.2,152.5,149.4,145.9,144.8,135.9,137.6,136,117.7,111.5,107.8,107.3,102.6,101,98.3,102.7,110.8,112.8,113.4,104.3,93.8,90.5) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 104 > (np <- floor(n / par1)) [1] 8 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 55.7 83.7 123.2 96.7 92.0 140.0 130.1 149.4 [2,] 59.2 86.4 136.9 91.6 87.4 149.4 131.1 145.9 [3,] 59.8 85.9 146.8 93.3 86.8 144.3 132.3 144.8 [4,] 61.6 80.4 149.6 93.3 83.7 154.4 128.6 135.9 [5,] 65.8 81.8 146.5 101.0 85.0 151.4 125.1 137.6 [6,] 64.2 87.5 157.0 100.4 81.7 145.5 128.7 136.0 [7,] 67.0 83.7 147.9 86.9 90.9 136.8 156.1 117.7 [8,] 62.8 87.0 133.6 83.9 101.5 146.6 163.2 111.5 [9,] 65.5 99.7 128.7 80.3 113.8 145.1 159.8 107.8 [10,] 75.2 101.4 100.8 87.7 120.1 133.6 157.4 107.3 [11,] 80.9 101.9 91.8 92.7 122.1 131.4 156.2 102.6 [12,] 83.2 115.7 89.3 95.5 132.5 127.5 152.5 101.0 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 66.74167 91.25833 129.34167 91.94167 99.79167 142.16667 143.42500 [8] 124.79167 > arr.sd [1] 8.638125 10.833237 23.470928 6.302158 17.700101 8.361528 15.034332 [8] 18.450645 > arr.range [1] 27.5 35.3 67.7 20.7 50.8 26.9 38.1 48.4 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 3.30840 0.09256 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -1.1797 0.7903 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 17.8004 0.1945 > postscript(file="/var/wessaorg/rcomp/tmp/12j0t1419941978.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2p21y1419941978.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3n6ct1419941978.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4qj6y1419941978.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/596kn1419941978.tab") > > try(system("convert tmp/12j0t1419941978.ps tmp/12j0t1419941978.png",intern=TRUE)) character(0) > try(system("convert tmp/2p21y1419941978.ps tmp/2p21y1419941978.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.046 0.169 1.218