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Type 'q()' to quit R. > x <- c(93.61,93.17,91.60,90.30,90.88,91.06,92.05,95.29,96.44,96.49,96.52,96.09,99.16,98.09,99.41,99.87,100.06,99.65,99.92,98.44,102.64,112.33,115.63,118.29,121.43,129.96,147.73,154.10,150.09,144.14,141.54,136.68,129.32,118.99,109.61,106.22,104.97,102.45,101.91,101.77,102.67,103.45,101.41,102.45,102.17,101.40,101.68,100.61,97.93,98.30,99.79,101.62,101.55,102.43,102.09,102.01,102.26,101.24,100.91,100.67,100.33,99.99,99.23,98.17,97.38,96.70,98.65,100.68,101.07,101.12,101.13,99.88,99.20,99.91,103.62,108.05,113.96,117.39,126.04,139.67,145.04,142.37,137.72,132.46) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 93.61 99.16 121.43 104.97 97.93 100.33 99.20 [2,] 93.17 98.09 129.96 102.45 98.30 99.99 99.91 [3,] 91.60 99.41 147.73 101.91 99.79 99.23 103.62 [4,] 90.30 99.87 154.10 101.77 101.62 98.17 108.05 [5,] 90.88 100.06 150.09 102.67 101.55 97.38 113.96 [6,] 91.06 99.65 144.14 103.45 102.43 96.70 117.39 [7,] 92.05 99.92 141.54 101.41 102.09 98.65 126.04 [8,] 95.29 98.44 136.68 102.45 102.01 100.68 139.67 [9,] 96.44 102.64 129.32 102.17 102.26 101.07 145.04 [10,] 96.49 112.33 118.99 101.40 101.24 101.12 142.37 [11,] 96.52 115.63 109.61 101.68 100.91 101.13 137.72 [12,] 96.09 118.29 106.22 100.61 100.67 99.88 132.46 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 93.6250 103.6242 132.4842 102.2450 100.9000 99.5275 122.1192 > arr.sd [1] 2.436844 7.308086 15.894027 1.123691 1.500339 1.510618 17.206810 > arr.range [1] 6.22 20.20 47.88 4.36 4.50 4.43 45.84 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -43.0952 0.4621 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -34.962 7.769 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -124.880 1.335 > postscript(file="/var/wessaorg/rcomp/tmp/1b6k41389557261.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2jg5v1389557261.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/364xp1389557261.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/49dwz1389557261.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5jqgv1389557261.tab") > > try(system("convert tmp/1b6k41389557261.ps tmp/1b6k41389557261.png",intern=TRUE)) character(0) > try(system("convert tmp/2jg5v1389557261.ps tmp/2jg5v1389557261.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.509 0.568 3.045