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Type 'q()' to quit R. > x <- c(100.17,101.13,99.25,99.69,101.04,99.79,100.35,101.45,100.4,100.52,102.52,101.23,102.14,101.06,100.31,101.18,101.28,101.99,101.34,100.5,103.74,104.19,102.23,103.32,104.67,103.22,102.64,105.26,103.63,102.71,104.34,102.92,105.92,107.39,105.68,105.86,107.05,106.77,105.88,106.23,107.53,105.51,107.37,105.61,108.38,109.6,106.62,105.69,107.06,105.67,106.24,107.9,105.91,106.44,107.69,105.9,108.59,111.36,109.36,109.21,111.3,109.21,110.95,110.89,111.04,108.96,110.5,109.02,112.87,112.73,113.28,113.53,112.99,112.68,114.26,114.28,114.28,114.2,113.64,114.2,116.68,116.73,118.71,117.8) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 100.17 102.14 104.67 107.05 107.06 111.30 112.99 [2,] 101.13 101.06 103.22 106.77 105.67 109.21 112.68 [3,] 99.25 100.31 102.64 105.88 106.24 110.95 114.26 [4,] 99.69 101.18 105.26 106.23 107.90 110.89 114.28 [5,] 101.04 101.28 103.63 107.53 105.91 111.04 114.28 [6,] 99.79 101.99 102.71 105.51 106.44 108.96 114.20 [7,] 100.35 101.34 104.34 107.37 107.69 110.50 113.64 [8,] 101.45 100.50 102.92 105.61 105.90 109.02 114.20 [9,] 100.40 103.74 105.92 108.38 108.59 112.87 116.68 [10,] 100.52 104.19 107.39 109.60 111.36 112.73 116.73 [11,] 102.52 102.23 105.68 106.62 109.36 113.28 118.71 [12,] 101.23 103.32 105.86 105.69 109.21 113.53 117.80 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 100.6283 101.9400 104.5200 106.8533 107.6108 111.1900 115.0375 > arr.sd [1] 0.8980366 1.2508761 1.5312859 1.2336003 1.7545238 1.6320149 1.9432640 > arr.range [1] 3.27 3.88 4.75 4.09 5.69 4.57 6.03 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -4.94805 0.06002 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -21.299 4.636 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -11.8711 0.1543 > postscript(file="/var/wessaorg/rcomp/tmp/1swmv1389587716.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2euev1389587716.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3bvfd1389587716.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/42dl51389587716.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5014c1389587716.tab") > > try(system("convert tmp/1swmv1389587716.ps tmp/1swmv1389587716.png",intern=TRUE)) character(0) > try(system("convert tmp/2euev1389587716.ps tmp/2euev1389587716.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.930 0.418 2.315