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Type 'q()' to quit R. > x <- c(37.3,39.5,40.6,41.4,41.3,43.5,44,44.9,46.4,47.4,48.7,49.7,51.1,53.2,56.2,58.1,60.6,64.1,67.4,68,70.9,72.8,74.9,76.1,77,78.1,80,79.7,82.7,84.3,83.5,85.9,87,88.6,90.6,91.3,91.6,93.2,95,95.2,97.4,98.6,99.6,100.6,101.3,102.8,103.2,103,105.4,104.7,105.2,105.2,102.8,100.3,99.8,99.4,100.6,100.2,100.4,98.8,96.9,96.3,96.1,93.5,92.1,91.7,87.9,86.4,84.9,81.7,82.6,83.1) > par1 = '4' > par1 <- '4' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 18 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13] [,14] [1,] 37.3 41.3 46.4 51.1 60.6 70.9 77.0 82.7 87.0 91.6 97.4 101.3 105.4 102.8 [2,] 39.5 43.5 47.4 53.2 64.1 72.8 78.1 84.3 88.6 93.2 98.6 102.8 104.7 100.3 [3,] 40.6 44.0 48.7 56.2 67.4 74.9 80.0 83.5 90.6 95.0 99.6 103.2 105.2 99.8 [4,] 41.4 44.9 49.7 58.1 68.0 76.1 79.7 85.9 91.3 95.2 100.6 103.0 105.2 99.4 [,15] [,16] [,17] [,18] [1,] 100.6 96.9 92.1 84.9 [2,] 100.2 96.3 91.7 81.7 [3,] 100.4 96.1 87.9 82.6 [4,] 98.8 93.5 86.4 83.1 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 39.700 43.425 48.050 54.650 65.025 73.675 78.700 84.100 89.375 [10] 93.750 99.050 102.575 105.125 100.575 100.000 95.700 89.525 83.075 > arr.sd [1] 1.7795130 1.5305228 1.4479871 3.1096624 3.4121108 2.2983690 1.4071247 [8] 1.3662601 1.9534158 1.6921387 1.3699148 0.8655441 0.2986079 1.5283433 [15] 0.8164966 1.5055453 2.8146936 1.3475286 > arr.range [1] 4.1 3.6 3.3 7.0 7.4 5.2 3.0 3.2 4.3 3.6 3.2 1.9 0.7 3.4 1.8 3.4 5.7 3.2 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 3.00440 -0.01628 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 3.5711 -0.7281 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 6.8709 -0.0385 > postscript(file="/var/wessaorg/rcomp/tmp/18a8n1416423327.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2cqaa1416423327.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3s84t1416423327.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4gdct1416423327.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5lc511416423327.tab") > > try(system("convert tmp/18a8n1416423327.ps tmp/18a8n1416423327.png",intern=TRUE)) character(0) > try(system("convert tmp/2cqaa1416423327.ps tmp/2cqaa1416423327.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.932 0.122 1.059