R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(75.6,74,75.3,83.1,84.9,83.5,88.2,87.4,77.8,74.5,75.3,78.7,71.4,75.8,79.2,84.4,84.4,87.2,92.4,88.5,94.8,100.9,110,107.9,111.2,116.7,125.8,131.5,146.2,155.4,157.5,137.2,121.3,89.1,69.6,56.7,58.5,56.4,60.5,64.6,73.2,84.6,80.4,88.4,84.6,90.8,94.9,93.1,96.6,93.1,98.3,105,95.6,94.3,95.3,97.1,98.1,104.4,107.8,114.3,118.7,124.1,134.2,142.4,133.8,131,133.2,125.9,126.2,122.7,126.6,124.8,128,134.1,138.8,134,124,110.4,116.7,124.7,126,122.8,120.2,121.2,125.4,127.9,122,117.5,117.9,117.9,122.7,125.7,126.1,123.2,120.6,123.5) > par2 = '12' > par1 = '50' > par2 <- '12' > par1 <- '50' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Blocked Bootstrap Plot for Central Tendency (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_bootstrapplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > par2 <- as.numeric(par2) > if (par1 < 10) par1 = 10 > if (par1 > 5000) par1 = 5000 > if (par2 < 3) par2 = 3 > if (par2 > length(x)) par2 = length(x) > library(lattice) > library(boot) Attaching package: 'boot' The following object is masked from 'package:lattice': melanoma > boot.stat <- function(s) + { + s.mean <- mean(s) + s.median <- median(s) + s.midrange <- (max(s) + min(s)) / 2 + c(s.mean, s.median, s.midrange) + } > (r <- tsboot(x, boot.stat, R=par1, l=12, sim='fixed')) BLOCK BOOTSTRAP FOR TIME SERIES Fixed Block Length of 12 Call: tsboot(tseries = x, statistic = boot.stat, R = par1, l = 12, sim = "fixed") Bootstrap Statistics : original bias std. error t1* 105.1896 0.6818958 6.335506 t2* 107.8500 0.7410000 11.804533 t3* 106.9500 -0.5530000 4.611879 > postscript(file="/var/wessaorg/rcomp/tmp/18pnf1429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,1],type='p',ylab='simulated values',main='Simulation of Mean') > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2gocu1429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,2],type='p',ylab='simulated values',main='Simulation of Median') > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/3or7p1429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,3],type='p',ylab='simulated values',main='Simulation of Midrange') > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/43swe1429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,1],col='black',main='Density Plot',xlab='mean') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/5kqol1429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,2],col='black',main='Density Plot',xlab='median') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/61m4c1429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,3],col='black',main='Density Plot',xlab='midrange') > dev.off() null device 1 > z <- data.frame(cbind(r$t[,1],r$t[,2],r$t[,3])) > colnames(z) <- list('mean','median','midrange') > postscript(file="/var/wessaorg/rcomp/tmp/76sr61429801545.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > boxplot(z,notch=TRUE,ylab='simulated values',main='Bootstrap Simulation - Central Tendency') Warning message: In bxp(list(stats = c(91.9010416666667, 101.225, 106.1546875, 110.335416666667, : some notches went outside hinges ('box'): maybe set notch=FALSE > grid() > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Estimation Results of Blocked Bootstrap',6,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'statistic',header=TRUE) > a<-table.element(a,'Q1',header=TRUE) > a<-table.element(a,'Estimate',header=TRUE) > a<-table.element(a,'Q3',header=TRUE) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,'IQR',header=TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'mean',header=TRUE) > q1 <- quantile(r$t[,1],0.25)[[1]] > q3 <- quantile(r$t[,1],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[1]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,1]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'median',header=TRUE) > q1 <- quantile(r$t[,2],0.25)[[1]] > q3 <- quantile(r$t[,2],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[2]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,2]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'midrange',header=TRUE) > q1 <- quantile(r$t[,3],0.25)[[1]] > q3 <- quantile(r$t[,3],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[3]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,3]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/8r5cw1429801545.tab") > > try(system("convert tmp/18pnf1429801545.ps tmp/18pnf1429801545.png",intern=TRUE)) character(0) > try(system("convert tmp/2gocu1429801545.ps tmp/2gocu1429801545.png",intern=TRUE)) character(0) > try(system("convert tmp/3or7p1429801545.ps tmp/3or7p1429801545.png",intern=TRUE)) character(0) > try(system("convert tmp/43swe1429801545.ps tmp/43swe1429801545.png",intern=TRUE)) character(0) > try(system("convert tmp/5kqol1429801545.ps tmp/5kqol1429801545.png",intern=TRUE)) character(0) > try(system("convert tmp/61m4c1429801545.ps tmp/61m4c1429801545.png",intern=TRUE)) character(0) > try(system("convert tmp/76sr61429801545.ps tmp/76sr61429801545.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.929 0.415 3.369