R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(3221816.00 + ,3209817.00 + ,3197649.00 + ,3172468.00 + ,3421574.00 + ,3408392.00 + ,3221816.00 + ,3097770.00 + ,3109769.00 + ,3109769.00 + ,3123120.00 + ,3147118.00 + ,3184467.00 + ,3184467.00 + ,3160469.00 + ,3097770.00 + ,3421574.00 + ,3470922.00 + ,3396393.00 + ,3221816.00 + ,3296514.00 + ,3184467.00 + ,3234998.00 + ,3259165.00 + ,3284346.00 + ,3221816.00 + ,3234998.00 + ,3147118.00 + ,3421574.00 + ,3508271.00 + ,3433742.00 + ,3296514.00 + ,3445741.00 + ,3284346.00 + ,3433742.00 + ,3421574.00 + ,3458923.00 + ,3321695.00 + ,3470922.00 + ,3458923.00 + ,3682848.00 + ,3632317.00 + ,3433742.00 + ,3333694.00 + ,3470922.00 + ,3284346.00 + ,3421574.00 + ,3445741.00 + ,3496272.00 + ,3384394.00 + ,3445741.00 + ,3483090.00 + ,3620318.00 + ,3508271.00 + ,3359044.00 + ,3197649.00 + ,3347045.00 + ,2936375.00 + ,3135119.00 + ,3246997.00 + ,3359044.00 + ,3197649.00 + ,3197649.00 + ,3197649.00 + ,3284346.00 + ,3160469.00 + ,2997891.00 + ,2861846.00 + ,2960542.00 + ,2575222.00 + ,2811315.00 + ,2948543.00 + ,2973724.00 + ,2836496.00 + ,2848495.00 + ,2811315.00 + ,2936375.00 + ,2848495.00 + ,2675270.00 + ,2550041.00 + ,2761798.00 + ,2301949.00 + ,2600572.00 + ,2736617.00 + ,2736617.00 + ,2575222.00 + ,2425995.00 + ,2413996.00 + ,2550041.00 + ,2425995.00 + ,2190071.00 + ,2027493.00 + ,2202070.00 + ,1791569.00 + ,2164721.00 + ,2363296.00 + ,2425995.00 + ,2288767.00 + ,2115373.00 + ,2239419.00 + ,2288767.00 + ,2251418.00 + ,1878097.00 + ,1704872.00 + ,1828749.00 + ,1455597.00 + ,1840917.00 + ,1978145.00 + ,2090023.00 + ,1903447.00 + ,1728870.00 + ,1828749.00 + ,1878097.00 + ,1779401.00 + ,1406249.00 + ,1243671.00 + ,1392898.00 + ,982397.00 + ,1430247.00 + ,1704872.00) > par3 = '512' > par2 = 'no' > par1 = '0' > ylab = 'Density' > xlab = 'Value' > par3 <- '512' > par2 <- 'no' > par1 <- '0' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa, P. (2012), Kernel Density Estimation (v1.0.11) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_density.wasp/ > #Source of accompanying publication: http://www.xycoon.com/density_trace.htm > # > if (par1 == '0') bw <- 'nrd0' > if (par1 != '0') bw <- as.numeric(par1) > par3 <- as.numeric(par3) > mydensity <- array(NA, dim=c(par3,8)) > postscript(file="/var/wessaorg/rcomp/tmp/125cb1438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity1<-density(x,bw=bw,kernel='gaussian',na.rm=TRUE) > mydensity[,8] = signif(mydensity1$x,3) > mydensity[,1] = signif(mydensity1$y,3) > plot(mydensity1,main='Gaussian Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > mydensity1 Call: density.default(x = x, bw = bw, kernel = "gaussian", na.rm = TRUE) Data: x (120 obs.); Bandwidth 'bw' = 2.214e+05 x y Min. : 318091 Min. :1.715e-10 1st Qu.:1325357 1st Qu.:3.068e-08 Median :2332622 Median :2.085e-07 Mean :2332622 Mean :2.479e-07 3rd Qu.:3339888 3rd Qu.:3.260e-07 Max. :4347154 Max. :8.547e-07 > postscript(file="/var/wessaorg/rcomp/tmp/2484b1438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity2<-density(x,bw=bw,kernel='epanechnikov',na.rm=TRUE) > mydensity[,2] = signif(mydensity2$y,3) > plot(mydensity2,main='Epanechnikov Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/35i301438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity3<-density(x,bw=bw,kernel='rectangular',na.rm=TRUE) > mydensity[,3] = signif(mydensity3$y,3) > plot(mydensity3,main='Rectangular Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/471qt1438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity4<-density(x,bw=bw,kernel='triangular',na.rm=TRUE) > mydensity[,4] = signif(mydensity4$y,3) > plot(mydensity4,main='Triangular Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/5oq0n1438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity5<-density(x,bw=bw,kernel='biweight',na.rm=TRUE) > mydensity[,5] = signif(mydensity5$y,3) > plot(mydensity5,main='Biweight Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/6sj8i1438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity6<-density(x,bw=bw,kernel='cosine',na.rm=TRUE) > mydensity[,6] = signif(mydensity6$y,3) > plot(mydensity6,main='Cosine Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/7qzcr1438866309.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > mydensity7<-density(x,bw=bw,kernel='optcosine',na.rm=TRUE) > mydensity[,7] = signif(mydensity7$y,3) > plot(mydensity7,main='Optcosine Kernel',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Properties of Density Trace',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Bandwidth',header=TRUE) > a<-table.element(a,mydensity1$bw) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'#Observations',header=TRUE) > a<-table.element(a,mydensity1$n) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/8tpb81438866309.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Maximum Density Values',3,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Kernel',1,TRUE) > a<-table.element(a,'x-value',1,TRUE) > a<-table.element(a,'max. density',1,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Gaussian',1,TRUE) > a<-table.element(a,mydensity1$x[mydensity1$y==max(mydensity1$y)],1) > a<-table.element(a,mydensity1$y[mydensity1$y==max(mydensity1$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Epanechnikov',1,TRUE) > a<-table.element(a,mydensity2$x[mydensity2$y==max(mydensity2$y)],1) > a<-table.element(a,mydensity2$y[mydensity2$y==max(mydensity2$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Rectangular',1,TRUE) > a<-table.element(a,mydensity3$x[mydensity3$y==max(mydensity3$y)],1) > a<-table.element(a,mydensity3$y[mydensity3$y==max(mydensity3$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Triangular',1,TRUE) > a<-table.element(a,mydensity4$x[mydensity4$y==max(mydensity4$y)],1) > a<-table.element(a,mydensity4$y[mydensity4$y==max(mydensity4$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Biweight',1,TRUE) > a<-table.element(a,mydensity5$x[mydensity5$y==max(mydensity5$y)],1) > a<-table.element(a,mydensity5$y[mydensity5$y==max(mydensity5$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Cosine',1,TRUE) > a<-table.element(a,mydensity6$x[mydensity6$y==max(mydensity6$y)],1) > a<-table.element(a,mydensity6$y[mydensity6$y==max(mydensity6$y)],1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Optcosine',1,TRUE) > a<-table.element(a,mydensity7$x[mydensity7$y==max(mydensity7$y)],1) > a<-table.element(a,mydensity7$y[mydensity7$y==max(mydensity7$y)],1) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/9dfv01438866309.tab") > if (par2=='yes') { + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Kernel Density Values',8,TRUE) + a<-table.row.end(a) + a<-table.row.start(a) + a<-table.element(a,'x-value',1,TRUE) + a<-table.element(a,'Gaussian',1,TRUE) + a<-table.element(a,'Epanechnikov',1,TRUE) + a<-table.element(a,'Rectangular',1,TRUE) + a<-table.element(a,'Triangular',1,TRUE) + a<-table.element(a,'Biweight',1,TRUE) + a<-table.element(a,'Cosine',1,TRUE) + a<-table.element(a,'Optcosine',1,TRUE) + a<-table.row.end(a) + for(i in 1:par3) { + a<-table.row.start(a) + a<-table.element(a,mydensity[i,8],1,TRUE) + for(j in 1:7) { + a<-table.element(a,mydensity[i,j],1) + } + a<-table.row.end(a) + } + a<-table.end(a) + table.save(a,file="/var/wessaorg/rcomp/tmp/10x2zs1438866309.tab") + } > > try(system("convert tmp/125cb1438866309.ps tmp/125cb1438866309.png",intern=TRUE)) character(0) > try(system("convert tmp/2484b1438866309.ps tmp/2484b1438866309.png",intern=TRUE)) character(0) > try(system("convert tmp/35i301438866309.ps tmp/35i301438866309.png",intern=TRUE)) character(0) > try(system("convert tmp/471qt1438866309.ps tmp/471qt1438866309.png",intern=TRUE)) character(0) > try(system("convert tmp/5oq0n1438866309.ps tmp/5oq0n1438866309.png",intern=TRUE)) character(0) > try(system("convert tmp/6sj8i1438866309.ps tmp/6sj8i1438866309.png",intern=TRUE)) character(0) > try(system("convert tmp/7qzcr1438866309.ps tmp/7qzcr1438866309.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.729 0.509 3.258