R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > y <- c(32,31.25,30.4,33.1,3.8,29.85,48.35,7.05,49.15,17.95,13.8,10.6,21.3,25.95) > x <- c(0.462043732,0.403772354,0.13768471,0.150952831,0.355061993,0.371372387,0.41761969,0.540203929,0.229629636,0.310237825,0.341485634,0.406667307,0.249576241,0.338681445) > ylab = '% Occ Type IIA' > xlab = 'NOMO Expression' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa, (2012), Kendall tau Rank Correlation (v1.0.11) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_kendall.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > library('Kendall') > k <- Kendall(x,y) > postscript(file="/var/wessaorg/rcomp/tmp/15fof1422738897.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > > plot(x,y,main='Scatterplot',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2rvtf1422738897.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > > plot(rank(x),rank(y),main='Scatterplot of Ranks',xlab=xlab,ylab=ylab) > grid() > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Kendall tau Rank Correlation',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Kendall tau',header=TRUE) > a<-table.element(a,k$tau) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'2-sided p-value',header=TRUE) > a<-table.element(a,k$sl) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Score',header=TRUE) > a<-table.element(a,k$S) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Var(Score)',header=TRUE) > a<-table.element(a,k$varS) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Denominator',header=TRUE) > a<-table.element(a,k$D) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3qxca1422738897.tab") > > try(system("convert tmp/15fof1422738897.ps tmp/15fof1422738897.png",intern=TRUE)) character(0) > try(system("convert tmp/2rvtf1422738897.ps tmp/2rvtf1422738897.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.002 0.182 1.185