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Type 'q()' to quit R. > x <- c(2.08,2.09,2.36,2.99,2.75,1.58,1.69,1.3,1.97,1.84,1.96,1.86,2.75,2.62,2.41,3.61,2.03,1.45,1.4,1.3,1.58,2.1,2.27,2.54,2.55,2.05,2.32,2.6,2.1,1.61,1.55,1.12,1.39,2.18,1.94,2.27,2.41,2.2,2.58,2.9,2.12,1.34,1.07,0.86,1,1.54,1.29,1.44,2.6,2.77,3.31,3.2,2.07,1.42,1.43,1.28,1.59,1.68,2.01,2.52,2.74,3.06,2.69,2.32,1.67,1.04,0.98,0.86,0.97,1.3,1.82,1.99,2.7,2.86,2.91,2.56,2.05,1.62,1.26,1.44,1.27,1.64,1.84,2.1,2.79,2.84,2.76,2.67,2.1,1.55,1.42,1.12,1.12,1.41,1.56,1.8) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 96 > (np <- floor(n / par1)) [1] 8 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 2.08 2.75 2.55 2.41 2.60 2.74 2.70 2.79 [2,] 2.09 2.62 2.05 2.20 2.77 3.06 2.86 2.84 [3,] 2.36 2.41 2.32 2.58 3.31 2.69 2.91 2.76 [4,] 2.99 3.61 2.60 2.90 3.20 2.32 2.56 2.67 [5,] 2.75 2.03 2.10 2.12 2.07 1.67 2.05 2.10 [6,] 1.58 1.45 1.61 1.34 1.42 1.04 1.62 1.55 [7,] 1.69 1.40 1.55 1.07 1.43 0.98 1.26 1.42 [8,] 1.30 1.30 1.12 0.86 1.28 0.86 1.44 1.12 [9,] 1.97 1.58 1.39 1.00 1.59 0.97 1.27 1.12 [10,] 1.84 2.10 2.18 1.54 1.68 1.30 1.64 1.41 [11,] 1.96 2.27 1.94 1.29 2.01 1.82 1.84 1.56 [12,] 1.86 2.54 2.27 1.44 2.52 1.99 2.10 1.80 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 2.039167 2.171667 1.973333 1.729167 2.156667 1.786667 2.020833 1.928333 > arr.sd [1] 0.4746761 0.6780833 0.4650383 0.6821151 0.7096777 0.7779616 0.6084475 [8] 0.6724424 > arr.range [1] 1.69 2.31 1.48 2.04 2.03 2.20 1.65 1.72 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.9639 -0.1672 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -0.09847 -0.54968 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 1.91741 -0.01387 > postscript(file="/var/wessaorg/rcomp/tmp/1xt151426097920.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/21o711426097920.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/34g2m1426097920.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4qlfe1426097920.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5w9sp1426097920.tab") > > try(system("convert tmp/1xt151426097920.ps tmp/1xt151426097920.png",intern=TRUE)) character(0) > try(system("convert tmp/21o711426097920.ps tmp/21o711426097920.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.912 0.168 1.061