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Type 'q()' to quit R. > x <- c(6.81,6.80,6.80,6.85,6.85,6.85,6.85,6.85,6.85,6.86,6.86,6.88,6.88,6.88,6.91,6.91,6.91,6.91,6.99,6.99,6.99,7.02,7.02,7.05,7.05,7.05,7.05,7.10,7.10,7.10,7.10,7.12,7.13,7.18,7.24,7.24,7.24,7.27,7.27,7.27,7.27,7.30,7.30,7.57,7.76,7.94,7.94,7.96,7.96,7.98,7.99,8.00,8.00,8.04,8.04,8.04,8.04,8.04,8.07,8.07,8.07,8.07,8.11,8.11,8.11,8.12,8.11,8.13,8.15,8.16,8.20,8.20,8.20,8.20,8.23,8.25,8.26,8.31,8.33,8.33,8.36,8.39,8.41,8.50,8.58,8.58,8.66,8.67,8.70,8.71,8.73,8.75,8.76,8.76,8.77,8.78) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 96 > (np <- floor(n / par1)) [1] 8 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 6.81 6.88 7.05 7.24 7.96 8.07 8.20 8.58 [2,] 6.80 6.88 7.05 7.27 7.98 8.07 8.20 8.58 [3,] 6.80 6.91 7.05 7.27 7.99 8.11 8.23 8.66 [4,] 6.85 6.91 7.10 7.27 8.00 8.11 8.25 8.67 [5,] 6.85 6.91 7.10 7.27 8.00 8.11 8.26 8.70 [6,] 6.85 6.91 7.10 7.30 8.04 8.12 8.31 8.71 [7,] 6.85 6.99 7.10 7.30 8.04 8.11 8.33 8.73 [8,] 6.85 6.99 7.12 7.57 8.04 8.13 8.33 8.75 [9,] 6.85 6.99 7.13 7.76 8.04 8.15 8.36 8.76 [10,] 6.86 7.02 7.18 7.94 8.04 8.16 8.39 8.76 [11,] 6.86 7.02 7.24 7.94 8.07 8.20 8.41 8.77 [12,] 6.88 7.05 7.24 7.96 8.07 8.20 8.50 8.78 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 6.842500 6.955000 7.121667 7.507500 8.022500 8.128333 8.314167 8.704167 > arr.sd [1] 0.02527126 0.06067799 0.06658328 0.30597460 0.03545163 0.04260460 0.09159777 [8] 0.06947313 > arr.range [1] 0.08 0.17 0.19 0.72 0.11 0.13 0.30 0.20 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.106178 -0.002464 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -5.050 1.133 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 0.16016 0.01004 > postscript(file="/var/wessaorg/rcomp/tmp/1fwpm1432152628.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2giwt1432152628.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/309g41432152628.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/42d901432152628.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5p5ki1432152628.tab") > > try(system("convert tmp/1fwpm1432152628.ps tmp/1fwpm1432152628.png",intern=TRUE)) character(0) > try(system("convert tmp/2giwt1432152628.ps tmp/2giwt1432152628.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.939 0.125 1.070