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Type 'q()' to quit R. > x <- c(2341 + ,2115 + ,2402 + ,2180 + ,2453 + ,2507 + ,2679 + ,2622 + ,2618 + ,2648 + ,2523 + ,2473 + ,2513 + ,2466 + ,2544 + ,2537 + ,2564 + ,2582 + ,2716 + ,2904 + ,2851 + ,2932 + ,2772 + ,2811 + ,2935 + ,2783 + ,3003 + ,2995 + ,3127 + ,2985 + ,3287 + ,3236 + ,3252 + ,3228 + ,2856 + ,3176 + ,3362 + ,3036 + ,3330 + ,3251 + ,3318 + ,3238 + ,3597 + ,3708 + ,3902 + ,3745 + ,3426 + ,3526 + ,3483 + ,3458 + ,3824 + ,3696 + ,3518 + ,3814 + ,3996 + ,4136 + ,4037 + ,3915 + ,3760 + ,3955 + ,4160 + ,4115 + ,4202 + ,4018 + ,4233 + ,4029 + ,4401 + ,4645 + ,4491 + ,4379 + ,4394 + ,4472 + ,4614 + ,4160 + ,4328 + ,4202 + ,4635 + ,4542 + ,4920 + ,4774 + ,4698 + ,4916 + ,4703 + ,4616 + ,4873 + ,4375 + ,4801 + ,4427 + ,4684 + ,4648 + ,5225 + ,5174 + ,5181 + ,5266 + ,4839 + ,5032 + ,5221 + ,4658 + ,5014 + ,4980 + ,4952 + ,4946 + ,5365 + ,5456 + ,5397 + ,5436 + ,4995 + ,5019 + ,5249 + ,4799 + ,5137 + ,4979 + ,4951 + ,5265 + ,5612 + ,5572 + ,5403 + ,5373 + ,5252 + ,5437 + ,5296 + ,5011 + ,5294 + ,5335 + ,5398 + ,5396 + ,5724 + ,5898 + ,5718 + ,5625 + ,5380 + ,5488 + ,5678 + ,5224 + ,5596 + ,5184 + ,5620 + ,5531 + ,5816 + ,6086 + ,6175 + ,6112 + ,5813 + ,5740 + ,5821 + ,5294 + ,5881 + ,5589 + ,5845 + ,5706 + ,6355 + ,6404 + ,6426 + ,6375 + ,5869 + ,5994 + ,6105 + ,5792 + ,6011 + ,5968 + ,6255 + ,6208 + ,6897 + ,6814 + ,6897 + ,6596 + ,6188 + ,6406 + ,6548 + ,5842 + ,6555 + ,6424 + ,6596 + ,6645 + ,7203 + ,7128 + ,7133 + ,6778 + ,6593 + ,6591 + ,6120 + ,5612 + ,6070 + ,5983 + ,6145 + ,6303 + ,6588 + ,6640 + ,6719 + ,6575 + ,6487 + ,6510 + ,6365 + ,5844 + ,5974 + ,5880 + ,6279 + ,6342 + ,6598 + ,6801 + ,6529 + ,6369 + ,6028 + ,6187 + ,6164 + ,5866 + ,6198 + ,5898 + ,6462 + ,6063 + ,6496 + ,6678 + ,6554 + ,6513 + ,6210 + ,5928 + ,6268 + ,5582 + ,5869 + ,5764 + ,6082 + ,6062 + ,6810 + ,6727 + ,6537 + ,6175 + ,6014 + ,6109) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 228 > (np <- floor(n / par1)) [1] 19 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13] [1,] 2341 2513 2935 3362 3483 4160 4614 4873 5221 5249 5296 5678 5821 [2,] 2115 2466 2783 3036 3458 4115 4160 4375 4658 4799 5011 5224 5294 [3,] 2402 2544 3003 3330 3824 4202 4328 4801 5014 5137 5294 5596 5881 [4,] 2180 2537 2995 3251 3696 4018 4202 4427 4980 4979 5335 5184 5589 [5,] 2453 2564 3127 3318 3518 4233 4635 4684 4952 4951 5398 5620 5845 [6,] 2507 2582 2985 3238 3814 4029 4542 4648 4946 5265 5396 5531 5706 [7,] 2679 2716 3287 3597 3996 4401 4920 5225 5365 5612 5724 5816 6355 [8,] 2622 2904 3236 3708 4136 4645 4774 5174 5456 5572 5898 6086 6404 [9,] 2618 2851 3252 3902 4037 4491 4698 5181 5397 5403 5718 6175 6426 [10,] 2648 2932 3228 3745 3915 4379 4916 5266 5436 5373 5625 6112 6375 [11,] 2523 2772 2856 3426 3760 4394 4703 4839 4995 5252 5380 5813 5869 [12,] 2473 2811 3176 3526 3955 4472 4616 5032 5019 5437 5488 5740 5994 [,14] [,15] [,16] [,17] [,18] [,19] [1,] 6105 6548 6120 6365 6164 6268 [2,] 5792 5842 5612 5844 5866 5582 [3,] 6011 6555 6070 5974 6198 5869 [4,] 5968 6424 5983 5880 5898 5764 [5,] 6255 6596 6145 6279 6462 6082 [6,] 6208 6645 6303 6342 6063 6062 [7,] 6897 7203 6588 6598 6496 6810 [8,] 6814 7128 6640 6801 6678 6727 [9,] 6897 7133 6719 6529 6554 6537 [10,] 6596 6778 6575 6369 6513 6175 [11,] 6188 6593 6487 6028 6210 6014 [12,] 6406 6591 6510 6187 5928 6109 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 2463.417 2682.667 3071.917 3453.250 3799.333 4294.917 4592.333 4877.083 [9] 5119.917 5252.417 5463.583 5714.583 5963.250 6344.750 6669.667 6312.667 [17] 6266.333 6252.500 6166.583 > arr.sd [1] 179.8279 166.6370 168.1187 248.8585 224.5988 197.9304 249.1930 305.7784 [9] 250.1478 249.9831 241.5813 317.4803 361.3551 377.1547 370.7933 331.6681 [17] 296.5254 281.5327 370.8311 > arr.range [1] 564 466 504 866 678 627 760 891 798 813 887 991 1132 1105 1361 [16] 1107 957 812 1228 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 48.69441 0.04501 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -0.8172 0.7547 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 91.8765 0.1562 > postscript(file="/var/wessaorg/rcomp/tmp/1pz4o1432153204.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/28whj1432153204.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3wgxs1432153204.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4fofd1432153204.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5v1hj1432153204.tab") > > try(system("convert tmp/1pz4o1432153204.ps tmp/1pz4o1432153204.png",intern=TRUE)) character(0) > try(system("convert tmp/28whj1432153204.ps tmp/28whj1432153204.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.039 0.158 1.201