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Type 'q()' to quit R. > x <- c(79.58,80.08,80.41,80.34,80.32,80.39,81.01,81.54,82.48,84.68,88.26,90.6,92.46,93.31,93.58,93.92,93.92,93.67,93.76,93.95,93.89,94.07,93.93,93.35,93.58,93.55,93.44,93.38,93.17,92.95,93.37,94.13,94.07,94,94.47,94.81,94.18,94.14,93.96,93.23,93.13,92.51,92.49,92.73,92.75,92.83,92.85,93.27,93.98,94.34,94.57,94.62,94.82,95.07,95.72,96.06,96.54,96.38,96.8,97.02,97.29,97.45,97.95,97.69,97.63,97.35,97.38,98.06,98.34,98.53,98.79,98.77,99.2,99.76,99.84,99.83,99.88,99.48,99.66,99.58,99.89,100.7,101.19,100.99,101.52,101.75,101.56,102.57,102.66,102.62,102.76,102.73,102.26,101.72,101.48,100.93) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 96 > (np <- floor(n / par1)) [1] 8 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 79.58 92.46 93.58 94.18 93.98 97.29 99.20 101.52 [2,] 80.08 93.31 93.55 94.14 94.34 97.45 99.76 101.75 [3,] 80.41 93.58 93.44 93.96 94.57 97.95 99.84 101.56 [4,] 80.34 93.92 93.38 93.23 94.62 97.69 99.83 102.57 [5,] 80.32 93.92 93.17 93.13 94.82 97.63 99.88 102.66 [6,] 80.39 93.67 92.95 92.51 95.07 97.35 99.48 102.62 [7,] 81.01 93.76 93.37 92.49 95.72 97.38 99.66 102.76 [8,] 81.54 93.95 94.13 92.73 96.06 98.06 99.58 102.73 [9,] 82.48 93.89 94.07 92.75 96.54 98.34 99.89 102.26 [10,] 84.68 94.07 94.00 92.83 96.38 98.53 100.70 101.72 [11,] 88.26 93.93 94.47 92.85 96.80 98.79 101.19 101.48 [12,] 90.60 93.35 94.81 93.27 97.02 98.77 100.99 100.93 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 82.47417 93.65083 93.74333 93.17250 95.49333 97.93583 100.00000 [8] 102.04667 > arr.sd [1] 3.5585376 0.4459201 0.5537859 0.6094875 1.0514262 0.5573225 0.6199120 [8] 0.6235577 > arr.range [1] 11.02 1.61 1.86 1.69 3.04 1.50 1.99 1.83 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 14.7706 -0.1452 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 36.053 -7.981 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 46.210 -0.455 > postscript(file="/var/wessaorg/rcomp/tmp/1lyoe1447713407.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2263r1447713407.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/300r01447713407.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/46nh21447713407.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5bx2l1447713407.tab") > > try(system("convert tmp/1lyoe1447713407.ps tmp/1lyoe1447713407.png",intern=TRUE)) character(0) > try(system("convert tmp/2263r1447713407.ps tmp/2263r1447713407.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.902 0.152 1.051