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Type 'q()' to quit R. > x <- c(85.95,86.41,86.42,86.81,86.71,86.7,87.07,86.96,87.04,87.5,88.32,88.56,88.92,89.56,90.21,90.42,91.23,91.73,92.21,91.65,91.8,91.63,91.09,90.89,90.98,91.29,90.77,90.96,90.89,90.72,90.66,90.94,90.7,90.74,90.98,91.13,91.54,91.93,92.27,92.59,92.96,92.95,92.99,93.05,93.34,93.47,93.59,93.96,94.49,95.04,95.52,95.75,96.07,96.37,96.48,96.4,96.66,96.81,97.19,97.23,97.94,98.52,98.73,98.8,98.77,98.54,98.72,99.15,99.32,99.5,99.39,99.4,99.37,99.69,99.83,99.79,99.94,100.11,100.21,100.15,100.21,100.13,100.2,100.36,100.5,100.66,100.72,100.41,100.3,100.38,100.55,100.17,100.09,100.22,100.09,99.98) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 96 > (np <- floor(n / par1)) [1] 8 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 85.95 88.92 90.98 91.54 94.49 97.94 99.37 100.50 [2,] 86.41 89.56 91.29 91.93 95.04 98.52 99.69 100.66 [3,] 86.42 90.21 90.77 92.27 95.52 98.73 99.83 100.72 [4,] 86.81 90.42 90.96 92.59 95.75 98.80 99.79 100.41 [5,] 86.71 91.23 90.89 92.96 96.07 98.77 99.94 100.30 [6,] 86.70 91.73 90.72 92.95 96.37 98.54 100.11 100.38 [7,] 87.07 92.21 90.66 92.99 96.48 98.72 100.21 100.55 [8,] 86.96 91.65 90.94 93.05 96.40 99.15 100.15 100.17 [9,] 87.04 91.80 90.70 93.34 96.66 99.32 100.21 100.09 [10,] 87.50 91.63 90.74 93.47 96.81 99.50 100.13 100.22 [11,] 88.32 91.09 90.98 93.59 97.19 99.39 100.20 100.09 [12,] 88.56 90.89 91.13 93.96 97.23 99.40 100.36 99.98 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 87.03750 90.94500 90.89667 92.88667 96.16750 98.89833 99.99917 [8] 100.33917 > arr.sd [1] 0.7636292 0.9933277 0.1896088 0.7029979 0.8372479 0.4644417 0.2826645 [8] 0.2378868 > arr.range [1] 2.61 3.29 0.63 2.42 2.74 1.56 0.99 0.74 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 3.51666 -0.03125 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 23.011 -5.222 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 12.0724 -0.1078 > postscript(file="/var/wessaorg/rcomp/tmp/1osg41448194411.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2ngzb1448194411.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3vmn31448194411.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4ebs41448194411.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5b7u81448194411.tab") > > try(system("convert tmp/1osg41448194411.ps tmp/1osg41448194411.png",intern=TRUE)) character(0) > try(system("convert tmp/2ngzb1448194411.ps tmp/2ngzb1448194411.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.839 0.136 0.978