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Type 'q()' to quit R. > x <- c(26.133,25.979,25.541,25.308,25.663,25.78,25.328,24.806,24.651,24.531,24.633,25.174,24.449,24.277,24.393,24.301,24.381,24.286,24.335,24.273,24.556,24.841,25.464,25.514,25.531,25.042,24.676,24.809,25.313,25.64,25.447,25.021,24.752,24.939,25.365,25.214,25.563,25.475,25.659,25.841,25.888,25.759,25.944,25.818,25.789,25.662,26.927,27.521,27.485,27.444,27.395,27.45,27.437,27.45,27.458,27.816,27.599,27.588,27.667,27.64) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 60 > (np <- floor(n / par1)) [1] 5 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [1,] 26.133 24.449 25.531 25.563 27.485 [2,] 25.979 24.277 25.042 25.475 27.444 [3,] 25.541 24.393 24.676 25.659 27.395 [4,] 25.308 24.301 24.809 25.841 27.450 [5,] 25.663 24.381 25.313 25.888 27.437 [6,] 25.780 24.286 25.640 25.759 27.450 [7,] 25.328 24.335 25.447 25.944 27.458 [8,] 24.806 24.273 25.021 25.818 27.816 [9,] 24.651 24.556 24.752 25.789 27.599 [10,] 24.531 24.841 24.939 25.662 27.588 [11,] 24.633 25.464 25.365 26.927 27.667 [12,] 25.174 25.514 25.214 27.521 27.640 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 25.29392 24.58917 25.14575 25.98717 27.53575 > arr.sd [1] 0.5471369 0.4496050 0.3194214 0.6063752 0.1260131 > arr.range [1] 1.602 1.241 0.964 2.046 0.421 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 2.97380 -0.09973 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 33.53 -10.64 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 7.5749 -0.2458 > postscript(file="/var/wessaorg/rcomp/tmp/115vl1448806895.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/29c6e1448806895.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3b4tq1448806895.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4mpnb1448806895.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5qtsc1448806895.tab") > > try(system("convert tmp/115vl1448806895.ps tmp/115vl1448806895.png",intern=TRUE)) character(0) > try(system("convert tmp/29c6e1448806895.ps tmp/29c6e1448806895.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.805 0.169 0.981