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Type 'q()' to quit R. > x <- c(2421.21,2378.63,2336.00,2250.79,3113.00,3070.38,2421.21,1990.13,2032.71,2032.71,2075.33,2165.17,1904.92,1644.25,1430.79,1430.79,2250.79,2336.00,1686.83,952.46,1340.96,1340.96,1644.25,1819.29,1776.67,1340.96,1559.04,1473.42,2207.79,2032.71,1340.96,824.25,1298.33,1430.79,1559.04,1729.46,1383.54,1084.92,1213.17,1255.75,2378.63,2378.63,1729.46,1644.25,1904.92,1776.67,2122.58,2553.67,2639.29,2032.71,1861.88,1686.83,2856.96,2942.58,2724.50,2942.58,2899.54,2553.67,2942.58,3373.67,3548.71,3027.79,2681.88,2942.58,4065.42,4411.33,4326.13,4496.50,4453.92,4022.83,4757.21,4932.25,5188.29,4411.33,4108.04,4453.92,5278.13,6012.50,5837.46,5837.46,5923.08,5624.00,6401.42,6401.42,6268.96,5534.17,5666.63,5752.25,6315.79,7050.17,6529.21,6789.92,6571.83,6444.00,7439.08,7221.00,6917.71,6486.63,6917.71,7135.79,7396.04,7741.92,7396.04,7609.50,7349.21,7306.63,8386.88,8476.71,8130.83,7524.29,8041.00,8258.67,8519.33,8907.83,8519.33,8822.63,8690.17,8216.04,9211.08,9211.08) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 120 > (np <- floor(n / par1)) [1] 10 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 2421.21 1904.92 1776.67 1383.54 2639.29 3548.71 5188.29 6268.96 6917.71 [2,] 2378.63 1644.25 1340.96 1084.92 2032.71 3027.79 4411.33 5534.17 6486.63 [3,] 2336.00 1430.79 1559.04 1213.17 1861.88 2681.88 4108.04 5666.63 6917.71 [4,] 2250.79 1430.79 1473.42 1255.75 1686.83 2942.58 4453.92 5752.25 7135.79 [5,] 3113.00 2250.79 2207.79 2378.63 2856.96 4065.42 5278.13 6315.79 7396.04 [6,] 3070.38 2336.00 2032.71 2378.63 2942.58 4411.33 6012.50 7050.17 7741.92 [7,] 2421.21 1686.83 1340.96 1729.46 2724.50 4326.13 5837.46 6529.21 7396.04 [8,] 1990.13 952.46 824.25 1644.25 2942.58 4496.50 5837.46 6789.92 7609.50 [9,] 2032.71 1340.96 1298.33 1904.92 2899.54 4453.92 5923.08 6571.83 7349.21 [10,] 2032.71 1340.96 1430.79 1776.67 2553.67 4022.83 5624.00 6444.00 7306.63 [11,] 2075.33 1644.25 1559.04 2122.58 2942.58 4757.21 6401.42 7439.08 8386.88 [12,] 2165.17 1819.29 1729.46 2553.67 3373.67 4932.25 6401.42 7221.00 8476.71 [,10] [1,] 8130.83 [2,] 7524.29 [3,] 8041.00 [4,] 8258.67 [5,] 8519.33 [6,] 8907.83 [7,] 8519.33 [8,] 8822.63 [9,] 8690.17 [10,] 8216.04 [11,] 9211.08 [12,] 9211.08 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 2357.273 1648.524 1547.785 1785.516 2621.399 3972.213 5456.421 6465.251 [9] 7426.731 8504.357 > arr.sd [1] 376.8216 393.1532 362.6804 495.9221 506.3789 748.9710 777.5569 607.2956 [9] 577.3017 500.5651 > arr.range [1] 1122.87 1383.54 1383.54 1468.75 1686.84 2250.37 2293.38 1904.91 1990.08 [10] 1686.79 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 421.0161 0.0272 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 4.0667 0.2678 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 1.357e+03 8.623e-02 > postscript(file="/var/wessaorg/rcomp/tmp/1nr4o1470741933.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2lpa41470741933.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3c6q01470741933.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4prr61470741933.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5uwvs1470741933.tab") > > try(system("convert tmp/1nr4o1470741933.ps tmp/1nr4o1470741933.png",intern=TRUE)) character(0) > try(system("convert tmp/2lpa41470741933.ps tmp/2lpa41470741933.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.886 0.102 0.990