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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_twosampletests_mean.wasp
Title produced by softwarePaired and Unpaired Two Samples Tests about the Mean
Date of computationFri, 04 Nov 2011 09:00:36 -0400
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2011/Nov/04/t1320411649jx37rfars5n2daa.htm/, Retrieved Fri, 01 Nov 2024 00:18:24 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=139624, Retrieved Fri, 01 Nov 2024 00:18:24 +0000
QR Codes:

Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact178

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-     [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 12:18:18] [80bca13c5f9401fbb753952fd2952f4a]
-   PD  [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 12:29:25] [80bca13c5f9401fbb753952fd2952f4a]
-   PD    [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 12:38:28] [80bca13c5f9401fbb753952fd2952f4a]
-    D      [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 12:46:57] [80bca13c5f9401fbb753952fd2952f4a]
-    D        [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 12:57:24] [80bca13c5f9401fbb753952fd2952f4a]
-    D            [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 13:00:36] [204816f6f70a8d342ddc2b9d4f4a80d3] [Current]
-    D              [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-04 13:02:49] [80bca13c5f9401fbb753952fd2952f4a]
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Dataset

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Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time1 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net
R Framework error message
Warning: there are blank lines in the 'Data X' field.
Please, use NA for missing data - blank lines are simply
 deleted and are NOT treated as missing values.

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 1 seconds \tabularnewline
R Server & 'Gwilym Jenkins' @ jenkins.wessa.net \tabularnewline
R Framework error message & 
Warning: there are blank lines in the 'Data X' field.
Please, use NA for missing data - blank lines are simply
 deleted and are NOT treated as missing values.
 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=139624&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]1 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Gwilym Jenkins' @ jenkins.wessa.net[/C][/ROW]
[ROW][C]R Framework error message[/C][C]
Warning: there are blank lines in the 'Data X' field.
Please, use NA for missing data - blank lines are simply
 deleted and are NOT treated as missing values.
[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=139624&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=139624&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time1 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net
R Framework error message
Warning: there are blank lines in the 'Data X' field.
Please, use NA for missing data - blank lines are simply
 deleted and are NOT treated as missing values.






Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.101694915254237
t-stat-1.28628015620765
df58
p-value0.203456349707192
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.259953198980892,0.056563368472417]
F-test to compare two variances
F-stat1.03412087912088
df64
p-value0.899670829234176
H0 value1
Alternativetwo.sided
CI Level0.95
CI[0.620706998627717,1.7118986837539]

\begin{tabular}{lllllllll}
\hline
Two Sample t-test (paired) \tabularnewline
Difference: Mean1 - Mean2 & -0.101694915254237 \tabularnewline
t-stat & -1.28628015620765 \tabularnewline
df & 58 \tabularnewline
p-value & 0.203456349707192 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [-0.259953198980892,0.056563368472417] \tabularnewline
F-test to compare two variances \tabularnewline
F-stat & 1.03412087912088 \tabularnewline
df & 64 \tabularnewline
p-value & 0.899670829234176 \tabularnewline
H0 value & 1 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [0.620706998627717,1.7118986837539] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=139624&T=1

[TABLE]
[ROW][C]Two Sample t-test (paired)[/C][/ROW]
[ROW][C]Difference: Mean1 - Mean2[/C][C]-0.101694915254237[/C][/ROW]
[ROW][C]t-stat[/C][C]-1.28628015620765[/C][/ROW]
[ROW][C]df[/C][C]58[/C][/ROW]
[ROW][C]p-value[/C][C]0.203456349707192[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][-0.259953198980892,0.056563368472417][/C][/ROW]
[ROW][C]F-test to compare two variances[/C][/ROW]
[ROW][C]F-stat[/C][C]1.03412087912088[/C][/ROW]
[ROW][C]df[/C][C]64[/C][/ROW]
[ROW][C]p-value[/C][C]0.899670829234176[/C][/ROW]
[ROW][C]H0 value[/C][C]1[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][0.620706998627717,1.7118986837539][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=139624&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=139624&T=1

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.101694915254237
t-stat-1.28628015620765
df58
p-value0.203456349707192
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.259953198980892,0.056563368472417]
F-test to compare two variances
F-stat1.03412087912088
df64
p-value0.899670829234176
H0 value1
Alternativetwo.sided
CI Level0.95
CI[0.620706998627717,1.7118986837539]






Welch Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.101694915254237
t-stat-1.28628015620765
df58
p-value0.203456349707192
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.259953198980892,0.056563368472417]

\begin{tabular}{lllllllll}
\hline
Welch Two Sample t-test (paired) \tabularnewline
Difference: Mean1 - Mean2 & -0.101694915254237 \tabularnewline
t-stat & -1.28628015620765 \tabularnewline
df & 58 \tabularnewline
p-value & 0.203456349707192 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [-0.259953198980892,0.056563368472417] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=139624&T=2

[TABLE]
[ROW][C]Welch Two Sample t-test (paired)[/C][/ROW]
[ROW][C]Difference: Mean1 - Mean2[/C][C]-0.101694915254237[/C][/ROW]
[ROW][C]t-stat[/C][C]-1.28628015620765[/C][/ROW]
[ROW][C]df[/C][C]58[/C][/ROW]
[ROW][C]p-value[/C][C]0.203456349707192[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][-0.259953198980892,0.056563368472417][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=139624&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=139624&T=2

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Welch Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.101694915254237
t-stat-1.28628015620765
df58
p-value0.203456349707192
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.259953198980892,0.056563368472417]






Wicoxon rank sum test with continuity correction (paired)
W92
p-value0.207429531095618
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.0855280312907432
p-value0.977430210965874
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.507692307692308
p-value2.38230058458022e-07

\begin{tabular}{lllllllll}
\hline
Wicoxon rank sum test with continuity correction (paired) \tabularnewline
W & 92 \tabularnewline
p-value & 0.207429531095618 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
Kolmogorov-Smirnov Test to compare Distributions of two Samples \tabularnewline
KS Statistic & 0.0855280312907432 \tabularnewline
p-value & 0.977430210965874 \tabularnewline
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples \tabularnewline
KS Statistic & 0.507692307692308 \tabularnewline
p-value & 2.38230058458022e-07 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=139624&T=3

[TABLE]
[ROW][C]Wicoxon rank sum test with continuity correction (paired)[/C][/ROW]
[ROW][C]W[/C][C]92[/C][/ROW]
[ROW][C]p-value[/C][C]0.207429531095618[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributions of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.0855280312907432[/C][/ROW]
[ROW][C]p-value[/C][C]0.977430210965874[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.507692307692308[/C][/ROW]
[ROW][C]p-value[/C][C]2.38230058458022e-07[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=139624&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=139624&T=3

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Wicoxon rank sum test with continuity correction (paired)
W92
p-value0.207429531095618
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.0855280312907432
p-value0.977430210965874
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.507692307692308
p-value2.38230058458022e-07


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = paired ; par6 = 0.0 ;
Parameters (R input):
par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = paired ; par6 = 0.0 ;
R code (references can be found in the software module):
par1 <- as.numeric(par1) #column number of first sample
par2 <- as.numeric(par2) #column number of second sample
par3 <- as.numeric(par3) #confidence (= 1 - alpha)
if (par5 == 'unpaired') paired <- FALSE else paired <- TRUE
par6 <- as.numeric(par6) #H0
z <- t(y)
if (par1 == par2) stop('Please, select two different column numbers')
if (par1 < 1) stop('Please, select a column number greater than zero for the first sample')
if (par2 < 1) stop('Please, select a column number greater than zero for the second sample')
if (par1 > length(z[1,])) stop('The column number for the first sample should be smaller')
if (par2 > length(z[1,])) stop('The column number for the second sample should be smaller')
if (par3 <= 0) stop('The confidence level should be larger than zero')
if (par3 >= 1) stop('The confidence level should be smaller than zero')
(r.t <- t.test(z[,par1],z[,par2],var.equal=TRUE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(v.t <- var.test(z[,par1],z[,par2],conf.level=par3))
(r.w <- t.test(z[,par1],z[,par2],var.equal=FALSE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(w.t <- wilcox.test(z[,par1],z[,par2],alternative=par4,paired=paired,mu=par6,conf.level=par3))
(ks.t <- ks.test(z[,par1],z[,par2],alternative=par4))
m1 <- mean(z[,par1],na.rm=T)
m2 <- mean(z[,par2],na.rm=T)
mdiff <- m1 - m2
newsam1 <- z[!is.na(z[,par1]),par1]
newsam2 <- z[,par2]+mdiff
newsam2 <- newsam2[!is.na(newsam2)]
(ks1.t <- ks.test(newsam1,newsam2,alternative=par4))
mydf <- data.frame(cbind(z[,par1],z[,par2]))
colnames(mydf) <- c('Variable 1','Variable 2')
bitmap(file='test1.png')
boxplot(mydf, notch=TRUE, ylab='value',main=main)
dev.off()
bitmap(file='test2.png')
qqnorm(z[,par1],main='Normal QQplot - Variable 1')
qqline(z[,par1])
dev.off()
bitmap(file='test3.png')
qqnorm(z[,par2],main='Normal QQplot - Variable 2')
qqline(z[,par2])
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.t$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.t$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.t$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.t$conf.int[1],',',r.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-test to compare two variances',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-stat',header=TRUE)
a<-table.element(a,v.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,v.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,v.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,v.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,v.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(v.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',v.t$conf.int[1],',',v.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Welch Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.w$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.w$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.w$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.w$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.w$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.w$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.w$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.w$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.w$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.w$conf.int[1],',',r.w$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Wicoxon rank sum test with continuity correction (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'W',header=TRUE)
a<-table.element(a,w.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,w.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,w.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,w.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributions of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks1.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks1.t$p.value)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')