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R Software Module

rwasp_chi_squared_tests.wasp

Title produced by software

Chi-Squared Test, McNemar Test, and Fisher Exact Test

Date of computation

Tue, 09 Dec 2014 20:53:34 +0000

Cite this page as follows

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2014/Dec/09/t14181586252yict9ho4q40n3p.htm/, Retrieved Tue, 10 Feb 2026 10:50:36 +0000

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=264848, Retrieved Tue, 10 Feb 2026 10:50:36 +0000

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User-defined keywords

Estimated Impact

285

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)

-       [Chi-Squared Test, McNemar Test, and Fisher Exact Test] [paper] [2014-12-09 20:53:34] [984e7ebcf70ed344d92ecabf69fab39c] [Current]

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Boxplots

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Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	2 seconds
R Server	'Gertrude Mary Cox' @ cox.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 2 seconds \tabularnewline
R Server & 'Gertrude Mary Cox' @ cox.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=264848&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]2 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Gertrude Mary Cox' @ cox.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=264848&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=264848&T=0

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	2 seconds
R Server	'Gertrude Mary Cox' @ cox.wessa.net

Tabulation of Results
Algebra4 x Estimation4
	A	B	D
A	50	36	38
B	78	156	188
C	18	50	72
D	3	14	27

\begin{tabular}{lllllllll}
\hline
Tabulation of Results \tabularnewline
Algebra4  x  Estimation4 \tabularnewline
  & A & B & D \tabularnewline
A & 50 & 36 & 38 \tabularnewline
B & 78 & 156 & 188 \tabularnewline
C & 18 & 50 & 72 \tabularnewline
D & 3 & 14 & 27 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=264848&T=1

[TABLE]
[ROW][C]Tabulation of Results[/C][/ROW]
[ROW][C]Algebra4  x  Estimation4[/C][/ROW]
[ROW][C] [/C][C]A[/C][C]B[/C][C]D[/C][/ROW]
[C]A[/C][C]50[/C][C]36[/C][C]38[/C][/ROW]
[C]B[/C][C]78[/C][C]156[/C][C]188[/C][/ROW]
[C]C[/C][C]18[/C][C]50[/C][C]72[/C][/ROW]
[C]D[/C][C]3[/C][C]14[/C][C]27[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=264848&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=264848&T=1

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Tabulation of Results
Algebra4 x Estimation4
	A	B	D
A	50	36	38
B	78	156	188
C	18	50	72
D	3	14	27

Tabulation of Expected Results
Algebra4 x Estimation4
	A	B	D
A	25.31	43.48	55.21
B	86.13	147.99	187.88
C	28.58	49.1	62.33
D	8.98	15.43	19.59

\begin{tabular}{lllllllll}
\hline
Tabulation of Expected Results \tabularnewline
Algebra4  x  Estimation4 \tabularnewline
  & A & B & D \tabularnewline
A & 25.31 & 43.48 & 55.21 \tabularnewline
B & 86.13 & 147.99 & 187.88 \tabularnewline
C & 28.58 & 49.1 & 62.33 \tabularnewline
D & 8.98 & 15.43 & 19.59 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=264848&T=2

[TABLE]
[ROW][C]Tabulation of Expected Results[/C][/ROW]
[ROW][C]Algebra4  x  Estimation4[/C][/ROW]
[ROW][C] [/C][C]A[/C][C]B[/C][C]D[/C][/ROW]
[C]A[/C][C]25.31[/C][C]43.48[/C][C]55.21[/C][/ROW]
[C]B[/C][C]86.13[/C][C]147.99[/C][C]187.88[/C][/ROW]
[C]C[/C][C]28.58[/C][C]49.1[/C][C]62.33[/C][/ROW]
[C]D[/C][C]8.98[/C][C]15.43[/C][C]19.59[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=264848&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=264848&T=2

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Tabulation of Expected Results
Algebra4 x Estimation4
	A	B	D
A	25.31	43.48	55.21
B	86.13	147.99	187.88
C	28.58	49.1	62.33
D	8.98	15.43	19.59

Statistical Results
Pearson's Chi-squared test
Pearson Chi Square Statistic	44.29
Degrees of Freedom	6
P value	0

\begin{tabular}{lllllllll}
\hline
Statistical Results \tabularnewline
Pearson's Chi-squared test \tabularnewline
Pearson Chi Square Statistic & 44.29 \tabularnewline
Degrees of Freedom & 6 \tabularnewline
P value & 0 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=264848&T=3

[TABLE]
[ROW][C]Statistical Results[/C][/ROW]
[ROW][C]Pearson's Chi-squared test[/C][/ROW]
[ROW][C]Pearson Chi Square Statistic[/C][C]44.29[/C][/ROW]
[ROW][C]Degrees of Freedom[/C][C]6[/C][/ROW]
[ROW][C]P value[/C][C]0[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=264848&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=264848&T=3

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Statistical Results
Pearson's Chi-squared test
Pearson Chi Square Statistic	44.29
Degrees of Freedom	6
P value	0

Figure 1

PNG link

Postscript link

PDF link

Parameters (Session):

Parameters (R input):

par1 = 1 ; par2 = 2 ; par3 = Pearson Chi-Squared ;

R code (references can be found in the software module):

library(vcd)
cat1 <- as.numeric(par1) #
cat2<- as.numeric(par2) #
simulate.p.value=FALSE
if (par3 == 'Exact Pearson Chi-Squared by Simulation') simulate.p.value=TRUE
x <- t(x)
(z <- array(unlist(x),dim=c(length(x[,1]),length(x[1,]))))
(table1 <- table(z[,cat1],z[,cat2]))
(V1<-dimnames(y)[[1]][cat1])
(V2<-dimnames(y)[[1]][cat2])
bitmap(file='pic1.png')
assoc(ftable(z[,cat1],z[,cat2],row.vars=1,dnn=c(V1,V2)),shade=T)
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tabulation of Results',ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste(V1,' x ', V2),ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1,TRUE)
for(nc in 1:ncol(table1)){
a<-table.element(a, colnames(table1)[nc], 1, TRUE)
}
a<-table.row.end(a)
for(nr in 1:nrow(table1) ){
a<-table.element(a, rownames(table1)[nr], 1, TRUE)
for(nc in 1:ncol(table1) ){
a<-table.element(a, table1[nr, nc], 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable.tab')
(cst<-chisq.test(table1, simulate.p.value=simulate.p.value) )
if (par3 == 'McNemar Chi-Squared') {
(cst <- mcnemar.test(table1))
}
if (par3=='Fisher Exact Test') {
(cst <- fisher.test(table1))
}
if ((par3 != 'McNemar Chi-Squared') & (par3 != 'Fisher Exact Test')) {
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tabulation of Expected Results',ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste(V1,' x ', V2),ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1,TRUE)
for(nc in 1:ncol(table1)){
a<-table.element(a, colnames(table1)[nc], 1, TRUE)
}
a<-table.row.end(a)
for(nr in 1:nrow(table1) ){
a<-table.element(a, rownames(table1)[nr], 1, TRUE)
for(nc in 1:ncol(table1) ){
a<-table.element(a, round(cst$expected[nr, nc], digits=2), 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
}
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Statistical Results',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, cst$method, 2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
if (par3=='Pearson Chi-Squared') a<-table.element(a, 'Pearson Chi Square Statistic', 1, TRUE)
if (par3=='Exact Pearson Chi-Squared by Simulation') a<-table.element(a, 'Exact Pearson Chi Square Statistic', 1, TRUE)
if (par3=='McNemar Chi-Squared') a<-table.element(a, 'McNemar Chi Square Statistic', 1, TRUE)
if (par3=='Fisher Exact Test') a<-table.element(a, 'Odds Ratio', 1, TRUE)
if (par3=='Fisher Exact Test') {
if ((ncol(table1) == 2) & (nrow(table1) == 2)) {
a<-table.element(a, round(cst$estimate, digits=2), 1,FALSE)
} else {
a<-table.element(a, '--', 1,FALSE)
}
} else {
a<-table.element(a, round(cst$statistic, digits=2), 1,FALSE)
}
a<-table.row.end(a)
if(!simulate.p.value){
if(par3!='Fisher Exact Test') {
a<-table.row.start(a)
a<-table.element(a, 'Degrees of Freedom', 1, TRUE)
a<-table.element(a, cst$parameter, 1,FALSE)
a<-table.row.end(a)
}
}
a<-table.row.start(a)
a<-table.element(a, 'P value', 1, TRUE)
a<-table.element(a, round(cst$p.value, digits=2), 1,FALSE)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')

Free Statistics

Description of Statistical Computation

Tree of Dependent Computations

Dataset

Tables (Output of Computation)

Figures (Output of Computation)

Input Parameters & R Code