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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_twosampletests_mean.wasp
Title produced by softwarePaired and Unpaired Two Samples Tests about the Mean
Date of computationFri, 28 Oct 2011 08:09:01 -0400
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2011/Oct/28/t1319803769zxz222ih1qnt41s.htm/, Retrieved Thu, 31 Oct 2024 23:03:22 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=137662, Retrieved Thu, 31 Oct 2024 23:03:22 +0000
QR Codes:

Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact225

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-     [Paired and Unpaired Two Samples Tests about the Mean] [treatment A] [2011-10-28 10:53:52] [380049693c521f4999989215fb37aeca]
- R  D  [Paired and Unpaired Two Samples Tests about the Mean] [Treatment T] [2011-10-28 11:41:35] [380049693c521f4999989215fb37aeca]
-    D      [Paired and Unpaired Two Samples Tests about the Mean] [Treatment S] [2011-10-28 12:09:01] [1b6261517283a6546869240081f8d68e] [Current]
-    D        [Paired and Unpaired Two Samples Tests about the Mean] [Treatment S] [2011-10-28 12:48:58] [380049693c521f4999989215fb37aeca]
-    D          [Paired and Unpaired Two Samples Tests about the Mean] [Treatment E] [2011-10-28 12:51:12] [380049693c521f4999989215fb37aeca]
-    D            [Paired and Unpaired Two Samples Tests about the Mean] [Treatment T] [2011-10-28 12:53:01] [380049693c521f4999989215fb37aeca]
-  M                [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 22:19:04] [46d7ccc24e5d35a2decd922dfb3b3a39]
- R               [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 18:06:11] [0748461f029d231b348d2f525a63e360]
- R  D              [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 18:15:32] [0748461f029d231b348d2f525a63e360]
- R  D              [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 18:18:13] [0748461f029d231b348d2f525a63e360]
-                 [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 22:11:13] [46d7ccc24e5d35a2decd922dfb3b3a39]
-               [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 22:14:35] [46d7ccc24e5d35a2decd922dfb3b3a39]
-             [Paired and Unpaired Two Samples Tests about the Mean] [] [2011-11-08 22:02:20] [46d7ccc24e5d35a2decd922dfb3b3a39]
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Dataset

Dataseries X:
Download CSV
Histogram
Boxplots 
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Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'George Udny Yule' @ yule.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 2 seconds \tabularnewline
R Server & 'George Udny Yule' @ yule.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=137662&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]2 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'George Udny Yule' @ yule.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=137662&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=137662&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'George Udny Yule' @ yule.wessa.net






Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.0571428571428571
t-stat-0.626947831813006
df34
p-value0.53488101573388
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.242370800813192,0.128085086527478]
F-test to compare two variances
F-stat0.993464052287582
df34
p-value0.984858744073723
H0 value1
Alternativetwo.sided
CI Level0.95
CI[0.501466047576137,1.96817078236551]

\begin{tabular}{lllllllll}
\hline
Two Sample t-test (paired) \tabularnewline
Difference: Mean1 - Mean2 & -0.0571428571428571 \tabularnewline
t-stat & -0.626947831813006 \tabularnewline
df & 34 \tabularnewline
p-value & 0.53488101573388 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [-0.242370800813192,0.128085086527478] \tabularnewline
F-test to compare two variances \tabularnewline
F-stat & 0.993464052287582 \tabularnewline
df & 34 \tabularnewline
p-value & 0.984858744073723 \tabularnewline
H0 value & 1 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [0.501466047576137,1.96817078236551] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=137662&T=1

[TABLE]
[ROW][C]Two Sample t-test (paired)[/C][/ROW]
[ROW][C]Difference: Mean1 - Mean2[/C][C]-0.0571428571428571[/C][/ROW]
[ROW][C]t-stat[/C][C]-0.626947831813006[/C][/ROW]
[ROW][C]df[/C][C]34[/C][/ROW]
[ROW][C]p-value[/C][C]0.53488101573388[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][-0.242370800813192,0.128085086527478][/C][/ROW]
[ROW][C]F-test to compare two variances[/C][/ROW]
[ROW][C]F-stat[/C][C]0.993464052287582[/C][/ROW]
[ROW][C]df[/C][C]34[/C][/ROW]
[ROW][C]p-value[/C][C]0.984858744073723[/C][/ROW]
[ROW][C]H0 value[/C][C]1[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][0.501466047576137,1.96817078236551][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=137662&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=137662&T=1

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.0571428571428571
t-stat-0.626947831813006
df34
p-value0.53488101573388
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.242370800813192,0.128085086527478]
F-test to compare two variances
F-stat0.993464052287582
df34
p-value0.984858744073723
H0 value1
Alternativetwo.sided
CI Level0.95
CI[0.501466047576137,1.96817078236551]






Welch Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.0571428571428571
t-stat-0.626947831813006
df34
p-value0.53488101573388
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.242370800813192,0.128085086527478]

\begin{tabular}{lllllllll}
\hline
Welch Two Sample t-test (paired) \tabularnewline
Difference: Mean1 - Mean2 & -0.0571428571428571 \tabularnewline
t-stat & -0.626947831813006 \tabularnewline
df & 34 \tabularnewline
p-value & 0.53488101573388 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [-0.242370800813192,0.128085086527478] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=137662&T=2

[TABLE]
[ROW][C]Welch Two Sample t-test (paired)[/C][/ROW]
[ROW][C]Difference: Mean1 - Mean2[/C][C]-0.0571428571428571[/C][/ROW]
[ROW][C]t-stat[/C][C]-0.626947831813006[/C][/ROW]
[ROW][C]df[/C][C]34[/C][/ROW]
[ROW][C]p-value[/C][C]0.53488101573388[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][-0.242370800813192,0.128085086527478][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=137662&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=137662&T=2

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Welch Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.0571428571428571
t-stat-0.626947831813006
df34
p-value0.53488101573388
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.242370800813192,0.128085086527478]






Wicoxon rank sum test with continuity correction (paired)
W22
p-value0.565318637427207
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.0571428571428571
p-value0.999999995591453
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.485714285714286
p-value0.000518798147327804

\begin{tabular}{lllllllll}
\hline
Wicoxon rank sum test with continuity correction (paired) \tabularnewline
W & 22 \tabularnewline
p-value & 0.565318637427207 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
Kolmogorov-Smirnov Test to compare Distributions of two Samples \tabularnewline
KS Statistic & 0.0571428571428571 \tabularnewline
p-value & 0.999999995591453 \tabularnewline
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples \tabularnewline
KS Statistic & 0.485714285714286 \tabularnewline
p-value & 0.000518798147327804 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=137662&T=3

[TABLE]
[ROW][C]Wicoxon rank sum test with continuity correction (paired)[/C][/ROW]
[ROW][C]W[/C][C]22[/C][/ROW]
[ROW][C]p-value[/C][C]0.565318637427207[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributions of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.0571428571428571[/C][/ROW]
[ROW][C]p-value[/C][C]0.999999995591453[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.485714285714286[/C][/ROW]
[ROW][C]p-value[/C][C]0.000518798147327804[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=137662&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=137662&T=3

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Wicoxon rank sum test with continuity correction (paired)
W22
p-value0.565318637427207
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.0571428571428571
p-value0.999999995591453
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.485714285714286
p-value0.000518798147327804


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = paired ; par6 = 0.0 ;
Parameters (R input):
par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = paired ; par6 = 0.0 ;
R code (references can be found in the software module):
par1 <- as.numeric(par1) #column number of first sample
par2 <- as.numeric(par2) #column number of second sample
par3 <- as.numeric(par3) #confidence (= 1 - alpha)
if (par5 == 'unpaired') paired <- FALSE else paired <- TRUE
par6 <- as.numeric(par6) #H0
z <- t(y)
if (par1 == par2) stop('Please, select two different column numbers')
if (par1 < 1) stop('Please, select a column number greater than zero for the first sample')
if (par2 < 1) stop('Please, select a column number greater than zero for the second sample')
if (par1 > length(z[1,])) stop('The column number for the first sample should be smaller')
if (par2 > length(z[1,])) stop('The column number for the second sample should be smaller')
if (par3 <= 0) stop('The confidence level should be larger than zero')
if (par3 >= 1) stop('The confidence level should be smaller than zero')
(r.t <- t.test(z[,par1],z[,par2],var.equal=TRUE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(v.t <- var.test(z[,par1],z[,par2],conf.level=par3))
(r.w <- t.test(z[,par1],z[,par2],var.equal=FALSE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(w.t <- wilcox.test(z[,par1],z[,par2],alternative=par4,paired=paired,mu=par6,conf.level=par3))
(ks.t <- ks.test(z[,par1],z[,par2],alternative=par4))
m1 <- mean(z[,par1],na.rm=T)
m2 <- mean(z[,par2],na.rm=T)
mdiff <- m1 - m2
newsam1 <- z[!is.na(z[,par1]),par1]
newsam2 <- z[,par2]+mdiff
newsam2 <- newsam2[!is.na(newsam2)]
(ks1.t <- ks.test(newsam1,newsam2,alternative=par4))
mydf <- data.frame(cbind(z[,par1],z[,par2]))
colnames(mydf) <- c('Variable 1','Variable 2')
bitmap(file='test1.png')
boxplot(mydf, notch=TRUE, ylab='value',main=main)
dev.off()
bitmap(file='test2.png')
qqnorm(z[,par1],main='Normal QQplot - Variable 1')
qqline(z[,par1])
dev.off()
bitmap(file='test3.png')
qqnorm(z[,par2],main='Normal QQplot - Variable 2')
qqline(z[,par2])
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.t$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.t$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.t$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.t$conf.int[1],',',r.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-test to compare two variances',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-stat',header=TRUE)
a<-table.element(a,v.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,v.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,v.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,v.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,v.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(v.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',v.t$conf.int[1],',',v.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Welch Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.w$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.w$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.w$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.w$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.w$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.w$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.w$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.w$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.w$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.w$conf.int[1],',',r.w$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Wicoxon rank sum test with continuity correction (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'W',header=TRUE)
a<-table.element(a,w.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,w.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,w.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,w.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributions of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks1.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks1.t$p.value)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')