Repository of Reproducible Computations

Free Statistics

of Irreproducible Research!

Author's title

Author

*The author of this computation has been verified*

R Software Module

rwasp_partialcorrelationmatrix.wasp

Title produced by software

Partial Correlation Matrix

Date of computation

Sun, 13 Dec 2015 10:54:01 +0000

Cite this page as follows

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2015/Dec/13/t1450004080un5ykt8j89o91k8.htm/, Retrieved Thu, 16 May 2024 07:48:08 +0000

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=286138, Retrieved Thu, 16 May 2024 07:48:08 +0000

QR Codes:

Paste this QR Code to cite your computation.

Original text written by user:

IsPrivate?

No (this computation is public)

User-defined keywords

Estimated Impact

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)

-       [Partial Correlation Matrix] [Partial pearson c...] [2015-12-13 10:54:01] [a05da232bd4bc389022edd498fae0565] [Current]

Feedback Forum

Post a new message

Dataseries X:

Download CSV

Histogram

Boxplots

1530 4512 1
1297 3738 1
1335 4261 1
1282 3777 1
1590 4177 1
1300 3585 1
1400 3785 1
1255 3559 1
1355 3613 1
1375 3982 1
1340 3443 1
1380 3993 1
1355 3640 1
1522 4208 1
1208 3832 1
1405 3876 1
1358 3497 1
1292 3466 1
1340 3095 1
1400 4424 1
1357 3878 1
1287 4046 1
1275 3804 1
1270 3710 1
1635 4747 1
1505 4423 1
1490 4036 1
1485 4022 1
1310 3454 1
1420 4175 1
1318 3787 1
1432 3796 1
1364 4103 1
1405 4161 1
1432 4158 1
1207 3814 1
1375 3527 1
1350 3748 1
1236 3334 1
1250 3492 1
1350 3962 1
1320 3505 1
1525 4315 1
1570 3804 1
1340 3863 1
1422 4034 1
1506 4308 1
1215 3165 1
1311 3641 1
1300 3644 1
1224 3891 1
1350 3793 1
1335 4270 1
1390 4063 1
1400 4012 1
1225 3458 1
1310 3890 1
1560 4166 2
1330 3935 2
1222 3669 2
1415 3866 2
1175 3393 2
1330 4442 2
1485 4253 2
1470 3727 2
1135 3329 2
1310 3415 2
1154 3372 2
1510 4430 2
1415 4381 2
1468 4008 2
1390 3858 2
1380 4121 2
1432 4057 2
1240 3824 2
1195 3394 2
1225 3558 2
1188 3362 2
1252 3930 2
1315 3835 2
1245 3830 2
1430 3856 2
1279 3249 2
1245 3577 2
1309 3933 2
1412 3850 2
1120 3309 2
1220 3406 2
1280 3506 2
1440 3907 2
1370 4160 2
1192 3318 2
1230 3662 2
1346 3899 2
1290 3700 2
1165 3779 2
1240 3473 2
1132 3490 2
1242 3654 2
1270 3478 2
1218 3495 2
1430 3834 2
1588 3876 2
1320 3661 2
1290 3618 2
1260 3648 2
1425 4032 2
1226 3399 2
1360 3916 2
1620 4430 2
1310 3695 2
1250 3524 2
1295 3571 2
1290 3594 2
1290 3383 2
1275 3499 2
1250 3589 2
1270 3900 2
1362 4114 2
1300 3937 2
1173 3399 2
1256 4200 2
1440 4488 2
1180 3614 2
1306 4051 2
1350 3782 2
1125 3391 2
1165 3124 2
1312 4053 2
1300 3582 2
1270 3666 2
1335 3532 2
1450 4046 2
1310 3667 2
1027 2857 1
1235 3436 1
1260 3791 1
1165 3302 1
1080 3104 1
1127 3171 1
1270 3572 1
1252 3530 1
1200 3175 1
1290 3438 1
1334 3903 1
1380 3899 1
1140 3401 1
1243 3267 1
1340 3451 1
1168 3090 1
1322 3413 1
1249 3323 1
1321 3680 1
1192 3439 1
1373 3853 1
1170 3156 1
1265 3279 1
1235 3707 1
1302 4006 1
1241 3269 1
1078 3071 1
1520 3779 1
1460 3548 1
1075 3292 1
1280 3497 1
1180 3082 1
1250 3248 1
1190 3358 1
1374 3803 1
1306 3566 1
1202 3145 1
1240 3503 1
1316 3571 1
1280 3724 1
1350 3615 1
1180 3203 1
1210 3609 1
1127 3561 1
1324 3979 1
1210 3533 1
1290 3689 1
1100 3158 1
1280 4005 1
1175 3181 1
1160 3479 1
1205 3642 1
1163 3632 1
1022 3069 2
1243 3394 2
1350 3703 2
1237 3165 2
1204 3354 2
1090 3000 2
1355 3687 2
1250 3556 2
1076 2773 2
1120 3058 2
1220 3344 2
1240 3493 2
1220 3297 2
1095 3360 2
1235 3228 2
1105 3277 2
1405 3851 2
1150 3067 2
1305 3692 2
1220 3402 2
1296 3995 2
1175 3318 2
955 2720 2
1070 2937 2
1320 3580 2
1060 2939 2
1130 2989 2
1250 3586 2
1225 3156 2
1180 3246 2
1178 3170 2
1142 3268 2
1130 3389 2
1185 3381 2
1012 2864 2
1280 3740 2
1103 3479 2
1408 3647 2
1300 3716 2
1246 3284 2
1380 4204 2
1350 3735 2
1060 3218 2
1350 3685 2
1220 3704 2
1110 3214 2
1215 3394 2
1104 3233 2
1170 3352 2
1120 3391 2

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	0 seconds
R Server	'George Udny Yule' @ yule.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 0 seconds \tabularnewline
R Server & 'George Udny Yule' @ yule.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=286138&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]0 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'George Udny Yule' @ yule.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=286138&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=286138&T=0

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	0 seconds
R Server	'George Udny Yule' @ yule.wessa.net

Pearson Correlation Matrix
> r0 Brain Head_size Age Brain 1.0000000 0.7995697 -0.1694376 Head_size 0.7995697 1.0000000 -0.1054281 Age -0.1694376 -0.1054281 1.0000000

\begin{tabular}{lllllllll}
\hline
Pearson Correlation Matrix \tabularnewline
> r0
               Brain  Head_size        Age
Brain      1.0000000  0.7995697 -0.1694376
Head_size  0.7995697  1.0000000 -0.1054281
Age       -0.1694376 -0.1054281  1.0000000
 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=286138&T=1

[TABLE]
[ROW][C]Pearson Correlation Matrix[/C][/ROW]
[ROW][C]> r0
               Brain  Head_size        Age
Brain      1.0000000  0.7995697 -0.1694376
Head_size  0.7995697  1.0000000 -0.1054281
Age       -0.1694376 -0.1054281  1.0000000
[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=286138&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=286138&T=1

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Pearson Correlation Matrix
> r0 Brain Head_size Age Brain 1.0000000 0.7995697 -0.1694376 Head_size 0.7995697 1.0000000 -0.1054281 Age -0.1694376 -0.1054281 1.0000000

Partial Pearson Correlation Matrix (Shrinkage Method)

> r1
               Brain  Head_size         Age
Brain      1.0000000 0.77940094 -0.13712630
Head_size  0.7794009 1.00000000  0.04291637
Age       -0.1371263 0.04291637  1.00000000
attr(,"lambda")
[1] 0.02245829
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    Brain Head_size       Age 
0.3817654 0.3883649 0.9707747

\begin{tabular}{lllllllll}
\hline
Partial Pearson Correlation Matrix (Shrinkage Method) \tabularnewline
> r1
               Brain  Head_size         Age
Brain      1.0000000 0.77940094 -0.13712630
Head_size  0.7794009 1.00000000  0.04291637
Age       -0.1371263 0.04291637  1.00000000
attr(,"lambda")
[1] 0.02245829
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    Brain Head_size       Age 
0.3817654 0.3883649 0.9707747 
 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=286138&T=2

[TABLE]
[ROW][C]Partial Pearson Correlation Matrix (Shrinkage Method)[/C][/ROW]
[ROW][C]> r1
               Brain  Head_size         Age
Brain      1.0000000 0.77940094 -0.13712630
Head_size  0.7794009 1.00000000  0.04291637
Age       -0.1371263 0.04291637  1.00000000
attr(,"lambda")
[1] 0.02245829
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    Brain Head_size       Age 
0.3817654 0.3883649 0.9707747 
[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=286138&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=286138&T=2

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Partial Pearson Correlation Matrix (Shrinkage Method)

> r1
               Brain  Head_size         Age
Brain      1.0000000 0.77940094 -0.13712630
Head_size  0.7794009 1.00000000  0.04291637
Age       -0.1371263 0.04291637  1.00000000
attr(,"lambda")
[1] 0.02245829
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    Brain Head_size       Age 
0.3817654 0.3883649 0.9707747

Parameters (Session):

Parameters (R input):

R code (references can be found in the software module):

library(corpcor)
x <- t(y)
(r1 <- pcor.shrink(x))
(r0 <- cor(x))
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Pearson Correlation Matrix',1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste('',RC.texteval('r0'),'
',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable0.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Partial Pearson Correlation Matrix (Shrinkage Method)',1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste('',RC.texteval('r1'),'
',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')

Free Statistics

Description of Statistical Computation

Tree of Dependent Computations

Dataset

Tables (Output of Computation)

Figures (Output of Computation)

Input Parameters & R Code