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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_twosampletests_mean.wasp
Title produced by softwarePaired and Unpaired Two Samples Tests about the Mean
Date of computationWed, 19 Dec 2012 07:42:50 -0500
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2012/Dec/19/t1355920994zkcfkpcs6t16ogd.htm/, Retrieved Fri, 01 Nov 2024 01:22:26 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=201888, Retrieved Fri, 01 Nov 2024 01:22:26 +0000
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Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact147

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-     [Paired and Unpaired Two Samples Tests about the Mean] [] [2010-11-01 13:31:55] [b98453cac15ba1066b407e146608df68]
-   P     [Paired and Unpaired Two Samples Tests about the Mean] [Treatment E] [2012-12-19 12:42:50] [908f17a9de5f9a248c0a6ccff2e5399c] [Current]
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Dataset

Dataseries X:
Download CSV
Histogram
Boxplots 
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1	1
1	0
1	1
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0	1
1	1
0	1
0	NA
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Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 2 seconds \tabularnewline
R Server & 'Gwilym Jenkins' @ jenkins.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=201888&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]2 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Gwilym Jenkins' @ jenkins.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=201888&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=201888&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net






Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.3
t-stat-2.75716190086342
df29
p-value0.00998129981286201
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.522536403265861,-0.0774635967341389]
F-test to compare two variances
F-stat1.21707128099174
df32
p-value0.596030021488084
H0 value1
Alternativetwo.sided
CI Level0.95
CI[0.586134549517359,2.4945389374076]

\begin{tabular}{lllllllll}
\hline
Two Sample t-test (paired) \tabularnewline
Difference: Mean1 - Mean2 & -0.3 \tabularnewline
t-stat & -2.75716190086342 \tabularnewline
df & 29 \tabularnewline
p-value & 0.00998129981286201 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [-0.522536403265861,-0.0774635967341389] \tabularnewline
F-test to compare two variances \tabularnewline
F-stat & 1.21707128099174 \tabularnewline
df & 32 \tabularnewline
p-value & 0.596030021488084 \tabularnewline
H0 value & 1 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [0.586134549517359,2.4945389374076] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=201888&T=1

[TABLE]
[ROW][C]Two Sample t-test (paired)[/C][/ROW]
[ROW][C]Difference: Mean1 - Mean2[/C][C]-0.3[/C][/ROW]
[ROW][C]t-stat[/C][C]-2.75716190086342[/C][/ROW]
[ROW][C]df[/C][C]29[/C][/ROW]
[ROW][C]p-value[/C][C]0.00998129981286201[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][-0.522536403265861,-0.0774635967341389][/C][/ROW]
[ROW][C]F-test to compare two variances[/C][/ROW]
[ROW][C]F-stat[/C][C]1.21707128099174[/C][/ROW]
[ROW][C]df[/C][C]32[/C][/ROW]
[ROW][C]p-value[/C][C]0.596030021488084[/C][/ROW]
[ROW][C]H0 value[/C][C]1[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][0.586134549517359,2.4945389374076][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=201888&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=201888&T=1

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.3
t-stat-2.75716190086342
df29
p-value0.00998129981286201
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.522536403265861,-0.0774635967341389]
F-test to compare two variances
F-stat1.21707128099174
df32
p-value0.596030021488084
H0 value1
Alternativetwo.sided
CI Level0.95
CI[0.586134549517359,2.4945389374076]






Welch Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.3
t-stat-2.75716190086342
df29
p-value0.00998129981286201
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.522536403265861,-0.0774635967341389]

\begin{tabular}{lllllllll}
\hline
Welch Two Sample t-test (paired) \tabularnewline
Difference: Mean1 - Mean2 & -0.3 \tabularnewline
t-stat & -2.75716190086342 \tabularnewline
df & 29 \tabularnewline
p-value & 0.00998129981286201 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.95 \tabularnewline
CI & [-0.522536403265861,-0.0774635967341389] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=201888&T=2

[TABLE]
[ROW][C]Welch Two Sample t-test (paired)[/C][/ROW]
[ROW][C]Difference: Mean1 - Mean2[/C][C]-0.3[/C][/ROW]
[ROW][C]t-stat[/C][C]-2.75716190086342[/C][/ROW]
[ROW][C]df[/C][C]29[/C][/ROW]
[ROW][C]p-value[/C][C]0.00998129981286201[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.95[/C][/ROW]
[ROW][C]CI[/C][C][-0.522536403265861,-0.0774635967341389][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=201888&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=201888&T=2

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Welch Two Sample t-test (paired)
Difference: Mean1 - Mean2-0.3
t-stat-2.75716190086342
df29
p-value0.00998129981286201
H0 value0
Alternativetwo.sided
CI Level0.95
CI[-0.522536403265861,-0.0774635967341389]






Wicoxon rank sum test with continuity correction (paired)
W14
p-value0.0140286306942676
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.339393939393939
p-value0.0535535045537597
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.393939393939394
p-value0.0152344169341024

\begin{tabular}{lllllllll}
\hline
Wicoxon rank sum test with continuity correction (paired) \tabularnewline
W & 14 \tabularnewline
p-value & 0.0140286306942676 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
Kolmogorov-Smirnov Test to compare Distributions of two Samples \tabularnewline
KS Statistic & 0.339393939393939 \tabularnewline
p-value & 0.0535535045537597 \tabularnewline
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples \tabularnewline
KS Statistic & 0.393939393939394 \tabularnewline
p-value & 0.0152344169341024 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=201888&T=3

[TABLE]
[ROW][C]Wicoxon rank sum test with continuity correction (paired)[/C][/ROW]
[ROW][C]W[/C][C]14[/C][/ROW]
[ROW][C]p-value[/C][C]0.0140286306942676[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributions of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.339393939393939[/C][/ROW]
[ROW][C]p-value[/C][C]0.0535535045537597[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.393939393939394[/C][/ROW]
[ROW][C]p-value[/C][C]0.0152344169341024[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=201888&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=201888&T=3

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Wicoxon rank sum test with continuity correction (paired)
W14
p-value0.0140286306942676
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.339393939393939
p-value0.0535535045537597
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.393939393939394
p-value0.0152344169341024


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = paired ; par6 = 0 ;
Parameters (R input):
par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = paired ; par6 = 0 ;
R code (references can be found in the software module):
par1 <- as.numeric(par1) #column number of first sample
par2 <- as.numeric(par2) #column number of second sample
par3 <- as.numeric(par3) #confidence (= 1 - alpha)
if (par5 == 'unpaired') paired <- FALSE else paired <- TRUE
par6 <- as.numeric(par6) #H0
z <- t(y)
if (par1 == par2) stop('Please, select two different column numbers')
if (par1 < 1) stop('Please, select a column number greater than zero for the first sample')
if (par2 < 1) stop('Please, select a column number greater than zero for the second sample')
if (par1 > length(z[1,])) stop('The column number for the first sample should be smaller')
if (par2 > length(z[1,])) stop('The column number for the second sample should be smaller')
if (par3 <= 0) stop('The confidence level should be larger than zero')
if (par3 >= 1) stop('The confidence level should be smaller than zero')
(r.t <- t.test(z[,par1],z[,par2],var.equal=TRUE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(v.t <- var.test(z[,par1],z[,par2],conf.level=par3))
(r.w <- t.test(z[,par1],z[,par2],var.equal=FALSE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(w.t <- wilcox.test(z[,par1],z[,par2],alternative=par4,paired=paired,mu=par6,conf.level=par3))
(ks.t <- ks.test(z[,par1],z[,par2],alternative=par4))
m1 <- mean(z[,par1],na.rm=T)
m2 <- mean(z[,par2],na.rm=T)
mdiff <- m1 - m2
newsam1 <- z[!is.na(z[,par1]),par1]
newsam2 <- z[,par2]+mdiff
newsam2 <- newsam2[!is.na(newsam2)]
(ks1.t <- ks.test(newsam1,newsam2,alternative=par4))
mydf <- data.frame(cbind(z[,par1],z[,par2]))
colnames(mydf) <- c('Variable 1','Variable 2')
bitmap(file='test1.png')
boxplot(mydf, notch=TRUE, ylab='value',main=main)
dev.off()
bitmap(file='test2.png')
qqnorm(z[,par1],main='Normal QQplot - Variable 1')
qqline(z[,par1])
dev.off()
bitmap(file='test3.png')
qqnorm(z[,par2],main='Normal QQplot - Variable 2')
qqline(z[,par2])
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.t$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.t$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.t$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.t$conf.int[1],',',r.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-test to compare two variances',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-stat',header=TRUE)
a<-table.element(a,v.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,v.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,v.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,v.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,v.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(v.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',v.t$conf.int[1],',',v.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Welch Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.w$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.w$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.w$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.w$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.w$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.w$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.w$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.w$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.w$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.w$conf.int[1],',',r.w$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Wicoxon rank sum test with continuity correction (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'W',header=TRUE)
a<-table.element(a,w.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,w.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,w.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,w.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributions of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks1.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks1.t$p.value)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')