Free Statistics

of Irreproducible Research!

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_regression_trees.wasp
Title produced by softwareRecursive Partitioning (Regression Trees)
Date of computationSat, 12 Jun 2010 19:27:49 +0000
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2010/Jun/12/t127637095641zroyalimtvyhc.htm/, Retrieved Tue, 30 Apr 2024 06:24:05 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=77866, Retrieved Tue, 30 Apr 2024 06:24:05 +0000
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Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact267
Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-       [Recursive Partitioning (Regression Trees)] [year 0] [2010-06-12 19:27:49] [d76b387543b13b5e3afd8ff9e5fdc89f] [Current]
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Dataseries X:
1.71921881166832	1.09407257087122	1.03595697273121	0.691604239744154	0.73635871095502	1.36492529789148	1.09719751437737	1.57838087058754	1.97925955686271	1.42943273138841	1.47921062825216	1.38917603174318	1.43568750157633	1.25341013198135	1.43716611164583	1.32728489061897
-0.321683499146815	-0.344147177195604	-0.276003985692744	-0.346928861326023	-0.441104110156724	-0.292409332407219	-0.22856229261299	-0.280285381933899	-0.225083282409583	-0.00292582881690018	-0.548061224111658	-0.349685913721857	-0.212910205253832	-0.30615606395429	-0.41715622440569	-0.387193832105167
0.654578820092227	1.27724582338138	1.03595697273121	1.19790032995478	0.400210535440902	1.52652495187694	0.738216025278713	1.39170490765916	1.63600305080324	1.77486314541358	1.23437923743609	1.53076987974538	1.5441442122847	1.27487973531918	1.51687527245898	1.50012571667201
-0.457997609164266	-0.392298344999809	-0.427793658185134	-0.440283024808998	-0.342016674836862	-0.427967539516645	-0.385124526548926	-0.325101600403792	-0.217414624073874	-0.280694829054297	-0.166802997393805	-0.531774234926515	-0.30553861061679	-0.446244865751854	-0.216617578019095	-0.419704759675183
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0.572412930774452	0.926881820935465	1.54901339576393	1.52795314187731	1.74963138751099	1.52652495187694	1.8176787270473	1.57838087058754	1.63600305080324	1.77486314541358	0.981801812616251	1.54333987479327	1.39683658510209	1.58205867092294	2.05066709909265	1.59481064174316
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1.69644199415307	1.62569827766569	1.2051727130408	1.52795314187731	1.57329239981076	1.83469272131832	1.99712899483104	1.5435161696461	0.962323238219402	1.42943273138841	1.70758412515289	1.3655214680451	1.5441442122847	1.72205010138613	1.10665038175672	1.52493240886879
1.58624103601128	1.51993033027747	1.37633242006275	1.67912655637172	2.06020003925212	1.36492529789148	1.27613675179791	1.7341494766618	0.631899931695041	1.06956225506551	1.22663320343232	1.22356085115971	1.39536054419063	1.09382515624654	1.22874974927716	1.54540613645019
0.811843858665197	0.994515387205948	0.510262663353784	0.691604239744154	0.9265755725555	0.604105012076117	0.557662743237417	0.628321245751849	0.631899931695041	0.724131841040338	0.753428315715515	0.665717529450732	0.816044095864239	0.939135274314885	0.938661717128843	1.32538003607675
1.57268611394753	1.00376731203156	1.37979765545434	1.19444521573658	-0.27449989059414	1.06084979104969	-0.1637226592844	0.93590111381304	1.30557974427888	1.42943273138841	1.47921062825216	1.03317244936364	1.10745453586713	0.644811010703565	0.744676270521409	1.58100432663417
-0.369705260220286	-0.184963644185483	-0.517369659205935	-0.293159730316982	-0.282412557922857	-0.332432818109298	-0.366534105598706	-0.407843146835241	-0.0914833362623136	-0.135241020354469	-0.362260039487885	-0.244141959312901	-0.318480987388953	-0.285554080458506	-0.242700655204371	-0.41993826770306
0.824610372886323	1.13264505909897	1.0520600944675	1.03718056788395	0.75023658485527	1.2074179065056	1.09810170422925	0.974353150956488	0.631899931695041	1.42943273138841	1.47921062825216	1.05794567057624	1.40354583114381	1.23736685504879	1.00857666062149	1.45705027167517
1.5030004540469	1.07283796477221	1.04136617483516	1.69465007258898	1.77521091128397	0.608943131330199	1.09790736914624	1.53597148935678	1.97925955686271	1.77486314541358	0.484392996980344	0.369959838398435	1.39683658510209	0.967406426523415	1.36791108889391	1.44430395411061
0.696957218822612	1.43367653834087	-0.188112621724826	2.19151387994057	-0.27449989059414	1.36901756049107	1.28086101478567	0.0956133776188286	0.288643425635566	0.378701427015166	1.25083713135142	1.21210951362634	1.26294745000292	1.44684575409405	0.170943060074654	0.401963317826962
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1.17785324797305	1.61007104848431	2.08886686016529	1.36723337980648	-0.27449989059414	1.05065637177422	1.45779304809677	1.73019213257448	1.30557974427888	1.77486314541358	1.48695666225593	1.56699443849136	1.29976997570922	0.951747621658106	1.55976904634965	1.47271214017957
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1.34291283426236	1.2674419762376	0.86674123242162	1.18846804709575	2.26211855072533	1.52652495187694	1.9982320090886	1.72660479637248	1.30557974427888	1.42943273138841	1.22663320343232	1.54333987479327	1.12995844219687	1.31914362968335	0.479100198686019	1.1624907858315
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-0.362647564560082	-0.445179552334564	-0.428047607029152	-0.314182427849893	-0.334008787394148	-0.348984147807873	-0.327231541655734	-0.301855524905662	-0.351014570221144	-0.280694829054297	-0.256108758184073	-0.290734988894757	-0.372041937393684	-0.385552501839331	-0.314602936402691	-0.451794870260851
1.45779947410495	1.17698152675341	1.39395681047828	1.18835398237835	1.58740812469029	1.37385567974515	1.4570831933279	1.39170490765916	0.644733131230155	1.08400231736324	1.70758412515289	1.18733629241374	1.12995844219687	0.972096448383355	1.0335921881178	1.20710483546697
1.47525167002687	1.08398353691522	1.90354799811941	1.71028765352363	1.41348321199687	1.37385567974515	1.8176787270473	0.93590111381304	1.30557974427888	1.06956225506551	1.47921062825216	2.21912248080637	1.70927489052327	1.55811568474884	0.493010294008211	1.51796628398508
1.10924228071902	1.51577108008186	1.20863794843239	2.19151387994057	1.43906273576985	1.67919422400873	0.915659088953004	1.57442352650023	1.97925955686271	1.44387279368614	1.47921062825216	1.71007371289126	1.99865693975823	1.950092804672	1.28110778011798	1.23266621839379
1.45779947410495	1.39702620273728	1.39049157508668	0.697581408384991	1.22326635039639	1.05474863437381	1.09770854474055	1.57838087058754	1.97925955686271	1.77486314541358	2.2049929407888	1.86311889842684	1.53595892533153	1.70106328701975	1.21318122547533	1.2049524159274
-0.630807454324473	-0.396758548027103	-0.367406833157206	-0.293159730316982	-0.329903763771428	-0.295313191908777	-0.275743237874221	-0.337856134602771	-0.744145750327244	-0.558463829291695	-0.45875546332139	-0.381062585837989	-0.453260817800254	-0.391559319993441	0.0481107069174976	-0.371935867300035
1.19097241728272	1.12088710708449	1.73433225780982	1.68521778972995	1.38548961321708	1.22728756428924	1.63673228551732	1.09166971988729	0.975156437754516	0.724131841040338	1.22663320343232	1.54333987479327	1.44239674761805	1.33831368451059	1.69196671167747	1.10565457626302
1.10534500686085	1.48084471425581	1.71822913607352	1.03120339924311	1.12849408402871	1.53061721447654	1.45669003383921	1.57083619029822	0.619066732159927	0.378701427015166	1.70758412515289	1.03317244936364	0.542456706917302	1.5667412910403	1.14574961138823	1.19982032609116
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1.18858558882523	1.66731050724945	1.39243554179905	1.37414360824287	1.08903668635548	1.82985460206424	1.09668648401418	1.72660479637248	1.97925955686271	2.13473362173649	1.731788053072	1.55590986984116	1.73030275594155	1.39573555066673	1.23854396659767	1.52886230836568
1.32935791219861	1.50558568953474	1.03595697273121	1.36114214644825	1.07492096147594	1.52652495187694	1.4570831933279	1.39170490765916	0.631899931695041	1.08400231736324	1.22663320343232	1.21099085611182	1.42136888219976	1.45009190007383	1.52729490400887	1.38582424836038
-0.338842421320367	-0.367871959753343	-0.276003985692744	-0.296579029815884	-0.615811437276019	-0.5011432122223	-0.67202563739309	-0.50864367434494	-0.225083282409583	-0.426148637754126	-0.256108758184073	-0.197548929731046	-0.500018160111718	-0.33107106405112	-0.194123436129784	-0.158618724811148
1.09071539215049	1.47080087261124	1.20863794843239	1.19790032995478	1.74963138751099	1.21835718243556	1.8176787270473	0.93590111381304	0.631899931695041	0.738571903338069	1.22663320343232	1.04574244441153	1.4198928412883	1.1968752336015	0.479100198686019	1.4624922796171
-0.462453917358246	-0.341832073668767	-0.578010433077881	-0.310763128350991	-0.411593637128726	-0.328465378912352	-0.32316962837622	-0.279278278353025	-0.358683228556853	-0.558463829291695	-0.45875546332139	-0.390569811278664	-0.404026170758622	-0.349234715518745	-0.353727552180604	-0.375865011368383
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0.448657050568915	0.853596909162277	1.37785368874198	1.35527904252481	1.41106913699006	0.903342399663819	1.45818620758546	0.787677188028106	0.962323238219402	1.42943273138841	0.981801812616251	1.19990628746163	0.96014690868452	1.31085409853165	1.94694091852211	1.25893027804409
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0.825398780728945	1.88090966317248	1.90354799811941	1.86146106801804	1.41348321199687	1.67919422400873	1.6376364753692	1.72264745228516	1.63600305080324	1.08400231736324	2.2049929407888	1.18770306129692	1.70779884961181	1.80345110444142	2.43983598674295	1.93533735718412
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1.73667100759024	1.72860055883178	1.56165128210864	1.19180909659655	1.22326635039639	1.22728756428924	1.27775079641866	0.604958569187041	1.30557974427888	1.78930320771132	1.70758412515289	1.19990628746163	1.22352061991035	1.39382597783171	0.274487007204347	1.48709597852818
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Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time6 seconds
R Server'George Udny Yule' @ 72.249.76.132

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 6 seconds \tabularnewline
R Server & 'George Udny Yule' @ 72.249.76.132 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=77866&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]6 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'George Udny Yule' @ 72.249.76.132[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=77866&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=77866&T=0

As an alternative you can also use a QR Code:  

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time6 seconds
R Server'George Udny Yule' @ 72.249.76.132







Model Performance
#Complexitysplitrelative errorCV errorCV S.D.
10.876011.0070.065
20.08110.1240.1260.012
30.0120.0420.0480.009

\begin{tabular}{lllllllll}
\hline
Model Performance \tabularnewline
# & Complexity & split & relative error & CV error & CV S.D. \tabularnewline
1 & 0.876 & 0 & 1 & 1.007 & 0.065 \tabularnewline
2 & 0.081 & 1 & 0.124 & 0.126 & 0.012 \tabularnewline
3 & 0.01 & 2 & 0.042 & 0.048 & 0.009 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=77866&T=1

[TABLE]
[ROW][C]Model Performance[/C][/ROW]
[ROW][C]#[/C][C]Complexity[/C][C]split[/C][C]relative error[/C][C]CV error[/C][C]CV S.D.[/C][/ROW]
[ROW][C]1[/C][C]0.876[/C][C]0[/C][C]1[/C][C]1.007[/C][C]0.065[/C][/ROW]
[ROW][C]2[/C][C]0.081[/C][C]1[/C][C]0.124[/C][C]0.126[/C][C]0.012[/C][/ROW]
[ROW][C]3[/C][C]0.01[/C][C]2[/C][C]0.042[/C][C]0.048[/C][C]0.009[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=77866&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=77866&T=1

As an alternative you can also use a QR Code:  

The GUIDs for individual cells are displayed in the table below:

Model Performance
#Complexitysplitrelative errorCV errorCV S.D.
10.876011.0070.065
20.08110.1240.1260.012
30.0120.0420.0480.009



Parameters (Session):
par1 = 16 ; par2 = No ;
Parameters (R input):
par1 = 16 ; par2 = No ;
R code (references can be found in the software module):
library(rpart)
library(partykit)
par1 <- as.numeric(par1)
autoprune <- function ( tree, method='Minimum CV'){
xerr <- tree$cptable[,'xerror']
cpmin.id <- which.min(xerr)
if (method == 'Minimum CV Error plus 1 SD'){
xstd <- tree$cptable[,'xstd']
errt <- xerr[cpmin.id] + xstd[cpmin.id]
cpSE1.min <- which.min( errt < xerr )
mycp <- (tree$cptable[,'CP'])[cpSE1.min]
}
if (method == 'Minimum CV') {
mycp <- (tree$cptable[,'CP'])[cpmin.id]
}
return (mycp)
}
conf.multi.mat <- function(true, new)
{
if ( all( is.na(match( levels(true),levels(new) ) )) )
stop ( 'conflict of vector levels')
multi.t <- list()
for (mylev in levels(true) ) {
true.tmp <- true
new.tmp <- new
left.lev <- levels (true.tmp)[- match(mylev,levels(true) ) ]
levels(true.tmp) <- list ( mylev = mylev, all = left.lev )
levels(new.tmp) <- list ( mylev = mylev, all = left.lev )
curr.t <- conf.mat ( true.tmp , new.tmp )
multi.t[[mylev]] <- curr.t
multi.t[[mylev]]$precision <-
round( curr.t$conf[1,1] / sum( curr.t$conf[1,] ), 2 )
}
return (multi.t)
}
x <- t(y)
k <- length(x[1,])
n <- length(x[,1])
x1 <- cbind(x[,par1], x[,1:k!=par1])
mycolnames <- c(colnames(x)[par1], colnames(x)[1:k!=par1])
colnames(x1) <- mycolnames #colnames(x)[par1]
m <- rpart(as.data.frame(x1))
par2
if (par2 != 'No') {
mincp <- autoprune(m,method=par2)
print(mincp)
m <- prune(m,cp=mincp)
}
m$cptable
bitmap(file='test1.png')
plot(as.party(m),tp_args=list(id=FALSE))
dev.off()
bitmap(file='test2.png')
plotcp(m)
dev.off()
cbind(y=m$y,pred=predict(m),res=residuals(m))
myr <- residuals(m)
myp <- predict(m)
bitmap(file='test4.png')
op <- par(mfrow=c(2,2))
plot(myr,ylab='residuals')
plot(density(myr),main='Residual Kernel Density')
plot(myp,myr,xlab='predicted',ylab='residuals',main='Predicted vs Residuals')
plot(density(myp),main='Prediction Kernel Density')
par(op)
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Model Performance',6,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'#',header=TRUE)
a<-table.element(a,'Complexity',header=TRUE)
a<-table.element(a,'split',header=TRUE)
a<-table.element(a,'relative error',header=TRUE)
a<-table.element(a,'CV error',header=TRUE)
a<-table.element(a,'CV S.D.',header=TRUE)
a<-table.row.end(a)
for (i in 1:length(m$cptable[,1])) {
a<-table.row.start(a)
a<-table.element(a,i,header=TRUE)
a<-table.element(a,round(m$cptable[i,'CP'],3))
a<-table.element(a,m$cptable[i,'nsplit'])
a<-table.element(a,round(m$cptable[i,'rel error'],3))
a<-table.element(a,round(m$cptable[i,'xerror'],3))
a<-table.element(a,round(m$cptable[i,'xstd'],3))
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable.tab')