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Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_hierarchicalclusteringdm.wasp
Title produced by softwareHierarchical Clustering
Date of computationMon, 14 May 2012 14:58:27 -0400
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2012/May/14/t1337021947xkjg37jknbexvbv.htm/, Retrieved Sun, 05 May 2024 09:52:58 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=166458, Retrieved Sun, 05 May 2024 09:52:58 +0000
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Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact182
Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-       [Hierarchical Clustering] [] [2012-05-14 18:58:27] [bd7a66e2f212a6bc9afe853e3942ee45] [Current]
- R P     [Hierarchical Clustering] [dendogra] [2012-05-23 07:09:38] [63813c3109753b730d344072266dee79]
-   P     [Hierarchical Clustering] [dendoo] [2012-05-23 07:11:41] [63813c3109753b730d344072266dee79]
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Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time1 seconds
R Server'Herman Ole Andreas Wold' @ wold.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 1 seconds \tabularnewline
R Server & 'Herman Ole Andreas Wold' @ wold.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=166458&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]1 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Herman Ole Andreas Wold' @ wold.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=166458&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=166458&T=0

As an alternative you can also use a QR Code:  

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time1 seconds
R Server'Herman Ole Andreas Wold' @ wold.wessa.net







Summary of Dendrogram
LabelHeight
C218.8414436814168
C420.2334244728334
C622.3606797749979
C822.9128784747792
C1023.6008474424119
C1223.7907545067406
C1423.9791576165636
C1625.1583349201692
C1825.9612128421961
C2026.6479955093817
C2226.7443514243676
C2428.2842712474619
C2628.3228492746603
C2828.4888186604222
C3028.596724677362
C3228.8617393793236
C3429.9348781728939
C3635.6384221994178
C3839.2393415096789
C4042.2445992607501
C4242.3596459994905
C4448.1718099439415
C4678.0589413753455

\begin{tabular}{lllllllll}
\hline
Summary of Dendrogram \tabularnewline
Label & Height \tabularnewline
C2 & 18.8414436814168 \tabularnewline
C4 & 20.2334244728334 \tabularnewline
C6 & 22.3606797749979 \tabularnewline
C8 & 22.9128784747792 \tabularnewline
C10 & 23.6008474424119 \tabularnewline
C12 & 23.7907545067406 \tabularnewline
C14 & 23.9791576165636 \tabularnewline
C16 & 25.1583349201692 \tabularnewline
C18 & 25.9612128421961 \tabularnewline
C20 & 26.6479955093817 \tabularnewline
C22 & 26.7443514243676 \tabularnewline
C24 & 28.2842712474619 \tabularnewline
C26 & 28.3228492746603 \tabularnewline
C28 & 28.4888186604222 \tabularnewline
C30 & 28.596724677362 \tabularnewline
C32 & 28.8617393793236 \tabularnewline
C34 & 29.9348781728939 \tabularnewline
C36 & 35.6384221994178 \tabularnewline
C38 & 39.2393415096789 \tabularnewline
C40 & 42.2445992607501 \tabularnewline
C42 & 42.3596459994905 \tabularnewline
C44 & 48.1718099439415 \tabularnewline
C46 & 78.0589413753455 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=166458&T=1

[TABLE]
[ROW][C]Summary of Dendrogram[/C][/ROW]
[ROW][C]Label[/C][C]Height[/C][/ROW]
[ROW][C]C2[/C][C]18.8414436814168[/C][/ROW]
[ROW][C]C4[/C][C]20.2334244728334[/C][/ROW]
[ROW][C]C6[/C][C]22.3606797749979[/C][/ROW]
[ROW][C]C8[/C][C]22.9128784747792[/C][/ROW]
[ROW][C]C10[/C][C]23.6008474424119[/C][/ROW]
[ROW][C]C12[/C][C]23.7907545067406[/C][/ROW]
[ROW][C]C14[/C][C]23.9791576165636[/C][/ROW]
[ROW][C]C16[/C][C]25.1583349201692[/C][/ROW]
[ROW][C]C18[/C][C]25.9612128421961[/C][/ROW]
[ROW][C]C20[/C][C]26.6479955093817[/C][/ROW]
[ROW][C]C22[/C][C]26.7443514243676[/C][/ROW]
[ROW][C]C24[/C][C]28.2842712474619[/C][/ROW]
[ROW][C]C26[/C][C]28.3228492746603[/C][/ROW]
[ROW][C]C28[/C][C]28.4888186604222[/C][/ROW]
[ROW][C]C30[/C][C]28.596724677362[/C][/ROW]
[ROW][C]C32[/C][C]28.8617393793236[/C][/ROW]
[ROW][C]C34[/C][C]29.9348781728939[/C][/ROW]
[ROW][C]C36[/C][C]35.6384221994178[/C][/ROW]
[ROW][C]C38[/C][C]39.2393415096789[/C][/ROW]
[ROW][C]C40[/C][C]42.2445992607501[/C][/ROW]
[ROW][C]C42[/C][C]42.3596459994905[/C][/ROW]
[ROW][C]C44[/C][C]48.1718099439415[/C][/ROW]
[ROW][C]C46[/C][C]78.0589413753455[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=166458&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=166458&T=1

As an alternative you can also use a QR Code:  

The GUIDs for individual cells are displayed in the table below:

Summary of Dendrogram
LabelHeight
C218.8414436814168
C420.2334244728334
C622.3606797749979
C822.9128784747792
C1023.6008474424119
C1223.7907545067406
C1423.9791576165636
C1625.1583349201692
C1825.9612128421961
C2026.6479955093817
C2226.7443514243676
C2428.2842712474619
C2628.3228492746603
C2828.4888186604222
C3028.596724677362
C3228.8617393793236
C3429.9348781728939
C3635.6384221994178
C3839.2393415096789
C4042.2445992607501
C4242.3596459994905
C4448.1718099439415
C4678.0589413753455







Summary of Cut Dendrogram
LabelHeight
118.6229025664637
219.8490204776775
321.4227597179764
424.6931164497315
525.5734237050888
627.2761467709606
732.4146460805622
835.7052680838024
940.6635729420897

\begin{tabular}{lllllllll}
\hline
Summary of Cut Dendrogram \tabularnewline
Label & Height \tabularnewline
1 & 18.6229025664637 \tabularnewline
2 & 19.8490204776775 \tabularnewline
3 & 21.4227597179764 \tabularnewline
4 & 24.6931164497315 \tabularnewline
5 & 25.5734237050888 \tabularnewline
6 & 27.2761467709606 \tabularnewline
7 & 32.4146460805622 \tabularnewline
8 & 35.7052680838024 \tabularnewline
9 & 40.6635729420897 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=166458&T=2

[TABLE]
[ROW][C]Summary of Cut Dendrogram[/C][/ROW]
[ROW][C]Label[/C][C]Height[/C][/ROW]
[ROW][C]1[/C][C]18.6229025664637[/C][/ROW]
[ROW][C]2[/C][C]19.8490204776775[/C][/ROW]
[ROW][C]3[/C][C]21.4227597179764[/C][/ROW]
[ROW][C]4[/C][C]24.6931164497315[/C][/ROW]
[ROW][C]5[/C][C]25.5734237050888[/C][/ROW]
[ROW][C]6[/C][C]27.2761467709606[/C][/ROW]
[ROW][C]7[/C][C]32.4146460805622[/C][/ROW]
[ROW][C]8[/C][C]35.7052680838024[/C][/ROW]
[ROW][C]9[/C][C]40.6635729420897[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=166458&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=166458&T=2

As an alternative you can also use a QR Code:  

The GUIDs for individual cells are displayed in the table below:

Summary of Cut Dendrogram
LabelHeight
118.6229025664637
219.8490204776775
321.4227597179764
424.6931164497315
525.5734237050888
627.2761467709606
732.4146460805622
835.7052680838024
940.6635729420897



Parameters (Session):
par1 = ward ; par2 = 10 ; par3 = FALSE ; par4 = FALSE ; par5 = all ; par6 = all ; par7 = all ; par8 = COLLES preferred ; par9 = variables ;
Parameters (R input):
par1 = ward ; par2 = 10 ; par3 = FALSE ; par4 = FALSE ; par5 = all ; par6 = all ; par7 = all ; par8 = COLLES preferred ; par9 = variables ;
R code (references can be found in the software module):
x <- as.data.frame(read.table(file='https://automated.biganalytics.eu/download/utaut.csv',sep=',',header=T))
x$U25 <- 6-x$U25
if(par5 == 'female') x <- x[x$Gender==0,]
if(par5 == 'male') x <- x[x$Gender==1,]
if(par6 == 'prep') x <- x[x$Pop==1,]
if(par6 == 'bachelor') x <- x[x$Pop==0,]
if(par7 != 'all') {
x <- x[x$Year==as.numeric(par7),]
}
cAc <- with(x,cbind( A1, A2, A3, A4, A5, A6, A7, A8, A9,A10))
cAs <- with(x,cbind(A11,A12,A13,A14,A15,A16,A17,A18,A19,A20))
cA <- cbind(cAc,cAs)
cCa <- with(x,cbind(C1,C3,C5,C7, C9,C11,C13,C15,C17,C19,C21,C23,C25,C27,C29,C31,C33,C35,C37,C39,C41,C43,C45,C47))
cCp <- with(x,cbind(C2,C4,C6,C8,C10,C12,C14,C16,C18,C20,C22,C24,C26,C28,C30,C32,C34,C36,C38,C40,C42,C44,C46,C48))
cC <- cbind(cCa,cCp)
cU <- with(x,cbind(U1,U2,U3,U4,U5,U6,U7,U8,U9,U10,U11,U12,U13,U14,U15,U16,U17,U18,U19,U20,U21,U22,U23,U24,U25,U26,U27,U28,U29,U30,U31,U32,U33))
cE <- with(x,cbind(BC,NNZFG,MRT,AFL,LPM,LPC,W,WPA))
cX <- with(x,cbind(X1,X2,X3,X4,X5,X6,X7,X8,X9,X10,X11,X12,X13,X14,X15,X16,X17,X18))
if (par8=='ATTLES connected') x <- cAc
if (par8=='ATTLES separate') x <- cAs
if (par8=='ATTLES all') x <- cA
if (par8=='COLLES actuals') x <- cCa
if (par8=='COLLES preferred') x <- cCp
if (par8=='COLLES all') x <- cC
if (par8=='CSUQ') x <- cU
if (par8=='Learning Activities') x <- cE
if (par8=='Exam Items') x <- cX
ncol <- length(x[1,])
for (jjj in 1:ncol) {
x <- x[!is.na(x[,jjj]),]
}
par3 <- as.logical(par3)
par4 <- as.logical(par4)
if (par3 == TRUE){
dum = xlab
xlab = ylab
ylab = dum
}
if (par9=='variables') {
x <- t(x)
} else {
ncol <- length(x[1,])
colnames(x) <- 1:ncol
}
hc <- hclust(dist(x),method=par1)
d <- as.dendrogram(hc)
str(d)
mysub <- paste('Method: ',par1)
bitmap(file='test1.png')
if (par4 == TRUE){
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
if (par2 != 'ALL'){
if (par3 == TRUE){
ylab = 'cluster'
} else {
xlab = 'cluster'
}
par2 <- as.numeric(par2)
memb <- cutree(hc, k = par2)
cent <- NULL
for(k in 1:par2){
cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
}
hc1 <- hclust(dist(cent),method=par1, members = table(memb))
de <- as.dendrogram(hc1)
bitmap(file='test2.png')
if (par4 == TRUE){
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
str(de)
}
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- length(x[,1])-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,hc$labels[i])
a<-table.element(a,hc$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
if (par2 != 'ALL'){
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- par2-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,i)
a<-table.element(a,hc1$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
}