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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_chi_squared_tests.wasp
Title produced by softwareChi-Squared Test, McNemar Test, and Fisher Exact Test
Date of computationThu, 08 Nov 2012 13:21:12 -0500
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2012/Nov/08/t13523989472bca40yb9czfbrt.htm/, Retrieved Mon, 29 Apr 2024 16:28:05 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=186930, Retrieved Mon, 29 Apr 2024 16:28:05 +0000
QR Codes:

Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact90

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-     [Chi-Squared Test, McNemar Test, and Fisher Exact Test] [workshop 6 qhi sq...] [2012-11-08 17:25:33] [053e1951668d36d4a346500be2403869]
-   P     [Chi-Squared Test, McNemar Test, and Fisher Exact Test] [workshop 6 chi de...] [2012-11-08 18:21:12] [2382f403a285d81cd69bebfa1420b1d7] [Current]
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Dataset

Dataseries X:
Download CSV
Histogram
Boxplots 
'C'	'A'	'C'	'A'	'B'	'A'
'C'	'C'	'A'	'A'	'B'	'A'
'B'	'C'	'C'	'C'	'D'	'B'
'D'	'D'	'C'	'A'	'A'	'D'
'D'	'C'	'D'	'D'	'C'	'A'
'A'	'D'	'C'	'C'	'A'	'D'
'B'	'A'	'A'	'A'	'B'	'C'
'B'	'D'	'C'	'A'	'B'	'B'
'C'	'C'	'D'	'D'	'A'	'D'
'D'	'D'	'D'	'D'	'D'	'A'
'B'	'C'	'C'	'A'	'B'	'B'
'D'	'D'	'A'	'C'	'A'	'D'
'B'	'C'	'A'	'C'	'C'	'D'
'A'	'C'	'A'	'C'	'B'	'D'
'B'	'C'	'C'	'A'	'A'	'A'
'A'	'C'	'A'	'A'	'A'	'D'
'B'	'C'	'C'	'C'	'D'	'A'
'A'	'D'	'C'	'C'	'D'	'C'
'A'	'B'	'D'	'A'	'D'	'B'
'A'	'A'	'C'	'A'	'B'	'D'
'C'	'B'	'C'	'B'	'B'	'C'
'B'	'A'	'A'	'B'	'A'	'A'
'A'	'C'	'C'	'A'	'C'	'C'
'C'	'A'	'A'	'A'	'A'	'D'
'C'	'D'	'C'	'C'	'B'	'A'
'C'	'C'	'D'	'A'	'D'	'A'
'B'	'A'	'A'	'A'	'D'	'A'
'C'	'C'	'D'	'D'	'D'	'C'
'A'	'C'	'C'	'D'	'B'	'B'
'A'	'B'	'A'	'A'	'A'	'B'
'D'	'B'	'A'	'A'	'B'	'D'
'A'	'B'	'C'	'B'	'D'	'D'
'B'	'B'	'A'	'C'	'D'	'A'
'D'	'D'	'D'	'D'	'D'	'A'
'A'	'B'	'A'	'A'	'C'	'B'
'B'	'B'	'A'	'A'	'D'	'B'
'D'	'B'	'C'	'B'	'B'	'A'
'B'	'D'	'A'	'A'	'B'	'B'
'B'	'A'	'A'	'A'	'D'	'C'
'B'	'B'	'A'	'A'	'D'	'A'
'D'	'D'	'A'	'B'	'D'	'B'
'A'	'A'	'D'	'A'	'B'	'B'
'B'	'A'	'A'	'A'	'B'	'A'
'A'	'B'	'D'	'D'	'B'	'B'
'D'	'A'	'C'	'B'	'A'	'A'
'B'	'A'	'A'	'A'	'B'	'B'
'A'	'A'	'A'	'A'	'B'	'D'
'B'	'D'	'A'	'A'	'C'	'C'
'A'	'D'	'A'	'D'	'D'	'A'
'A'	'A'	'A'	'A'	'A'	'B'
'B'	'D'	'A'	'B'	'C'	'A'
'D'	'D'	'D'	'A'	'B'	'B'
'A'	'D'	'A'	'A'	'C'	'D'
'C'	'B'	'A'	'A'	'B'	'C'
'A'	'A'	'A'	'A'	'A'	'D'
'B'	'A'	'A'	'A'	'B'	'D'
'A'	'C'	'C'	'A'	'A'	'B'
'C'	'B'	'C'	'B'	'B'	'B'
'C'	'D'	'A'	'C'	'B'	'B'
'A'	'A'	'C'	'D'	'B'	'B'
'C'	'B'	'A'	'A'	'B'	'B'
'D'	'C'	'A'	'A'	'C'	'A'
'C'	'C'	'C'	'A'	'D'	'A'
'D'	'B'	'D'	'D'	'A'	'B'
'B'	'C'	'A'	'A'	'C'	'A'
'B'	'A'	'A'	'A'	'B'	'B'
'C'	'D'	'C'	'A'	'B'	'A'
'D'	'D'	'D'	'A'	'C'	'D'
'A'	'B'	'A'	'C'	'A'	'C'
'A'	'B'	'A'	'A'	'D'	'A'
'B'	'D'	'A'	'D'	'B'	'C'
'A'	'B'	'A'	'A'	'A'	'C'
'C'	'B'	'C'	'C'	'B'	'D'
'A'	'B'	'A'	'A'	'A'	'D'
'A'	'B'	'A'	'B'	'D'	'A'
'B'	'A'	'A'	'A'	'A'	'B'
'C'	'D'	'C'	'B'	'D'	'C'
'C'	'A'	'A'	'B'	'B'	'A'
'A'	'C'	'D'	'A'	'D'	'A'
'A'	'B'	'A'	'A'	'A'	'C'
'A'	'A'	'A'	'A'	'B'	'A'
'B'	'B'	'A'	'B'	'D'	'A'
'A'	'A'	'D'	'D'	'D'	'A'
'D'	'B'	'A'	'A'	'B'	'A'
'D'	'C'	'A'	'A'	'D'	'A'
'C'	'A'	'A'	'B'	'C'	'C'
'C'	'C'	'D'	'B'	'B'	'A'
'A'	'B'	'D'	'C'	'A'	'B'
'A'	'C'	'A'	'A'	'A'	'D'
'C'	'A'	'C'	'A'	'B'	'A'
'B'	'A'	'C'	'D'	'B'	'B'
'C'	'B'	'D'	'B'	'B'	'D'
'A'	'B'	'A'	'A'	'B'	'A'
'C'	'A'	'D'	'B'	'D'	'A'
'D'	'D'	'A'	'A'	'B'	'A'
'A'	'A'	'D'	'A'	'B'	'C'
'A'	'A'	'A'	'A'	'B'	'D'
'C'	'D'	'C'	'A'	'B'	'C'
'D'	'C'	'A'	'A'	'C'	'C'
'A'	'C'	'C'	'C'	'A'	'D'
'A'	'A'	'A'	'B'	'A'	'D'
'C'	'B'	'C'	'D'	'A'	'C'
'B'	'C'	'D'	'B'	'B'	'B'
'C'	'C'	'A'	'C'	'C'	'C'
'D'	'C'	'D'	'B'	'D'	'A'
'A'	'A'	'A'	'D'	'B'	'D'
'D'	'D'	'D'	'B'	'B'	'A'
'A'	'A'	'C'	'A'	'B'	'B'
'C'	'D'	'C'	'A'	'A'	'A'
'D'	'D'	'D'	'D'	'D'	'A'
'B'	'B'	'C'	'B'	'B'	'A'
'D'	'B'	'D'	'C'	'D'	'A'
'B'	'B'	'D'	'D'	'B'	'C'
'D'	'B'	'D'	'D'	'C'	'B'
'C'	'B'	'A'	'D'	'B'	'D'
'D'	'B'	'C'	'D'	'A'	'A'
'D'	'B'	'A'	'A'	'B'	'B'
'D'	'D'	'A'	'B'	'B'	'B'
'A'	'D'	'D'	'D'	'A'	'C'
'C'	'D'	'A'	'A'	'A'	'B'
'B'	'B'	'D'	'A'	'D'	'B'
'C'	'D'	'A'	'A'	'D'	'C'
'B'	'C'	'D'	'D'	'D'	'A'
'A'	'A'	'D'	'D'	'A'	'B'
'A'	'A'	'C'	'A'	'C'	'A'
'B'	'A'	'A'	'D'	'A'	'D'
'B'	'A'	'A'	'D'	'D'	'B'
'B'	'B'	'C'	'D'	'D'	'A'
'C'	'D'	'D'	'D'	'C'	'A'
'B'	'C'	'A'	'A'	'C'	'A'
'C'	'A'	'D'	'D'	'B'	'A'
'C'	'B'	'C'	'D'	'A'	'C'
'B'	'C'	'A'	'B'	'C'	'D'
'C'	'B'	'D'	'D'	'D'	'A'
'B'	'B'	'D'	'D'	'C'	'A'

Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time3 seconds
R Server'Sir Maurice George Kendall' @ kendall.wessa.net
R Framework error message
The field 'Names of X columns' contains a hard return which cannot be interpreted.
Please, resubmit your request without hard returns in the 'Names of X columns'.

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 3 seconds \tabularnewline
R Server & 'Sir Maurice George Kendall' @ kendall.wessa.net \tabularnewline
R Framework error message & 
The field 'Names of X columns' contains a hard return which cannot be interpreted.
Please, resubmit your request without hard returns in the 'Names of X columns'.
 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=186930&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]3 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Sir Maurice George Kendall' @ kendall.wessa.net[/C][/ROW]
[ROW][C]R Framework error message[/C][C]
The field 'Names of X columns' contains a hard return which cannot be interpreted.
Please, resubmit your request without hard returns in the 'Names of X columns'.
[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=186930&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=186930&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time3 seconds
R Server'Sir Maurice George Kendall' @ kendall.wessa.net
R Framework error message
The field 'Names of X columns' contains a hard return which cannot be interpreted.
Please, resubmit your request without hard returns in the 'Names of X columns'.






Tabulation of Results
Depression x Connected
ABCD
A8151414
B121246
C75101
D14454

\begin{tabular}{lllllllll}
\hline
Tabulation of Results \tabularnewline
Depression
  x  Connected \tabularnewline
  & A & B & C & D \tabularnewline
A & 8 & 15 & 14 & 14 \tabularnewline
B & 12 & 12 & 4 & 6 \tabularnewline
C & 7 & 5 & 10 & 1 \tabularnewline
D & 14 & 4 & 5 & 4 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=186930&T=1

[TABLE]
[ROW][C]Tabulation of Results[/C][/ROW]
[ROW][C]Depression
  x  Connected[/C][/ROW]
[ROW][C] [/C][C]A[/C][C]B[/C][C]C[/C][C]D[/C][/ROW]
[C]A[/C][C]8[/C][C]15[/C][C]14[/C][C]14[/C][/ROW]
[C]B[/C][C]12[/C][C]12[/C][C]4[/C][C]6[/C][/ROW]
[C]C[/C][C]7[/C][C]5[/C][C]10[/C][C]1[/C][/ROW]
[C]D[/C][C]14[/C][C]4[/C][C]5[/C][C]4[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=186930&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=186930&T=1

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Tabulation of Results
Depression x Connected
ABCD
A8151414
B121246
C75101
D14454






Tabulation of Expected Results
Depression x Connected
ABCD
A15.4913.612.479.44
B10.339.078.316.3
C6.996.135.624.26
D8.27.26.65

\begin{tabular}{lllllllll}
\hline
Tabulation of Expected Results \tabularnewline
Depression
  x  Connected \tabularnewline
  & A & B & C & D \tabularnewline
A & 15.49 & 13.6 & 12.47 & 9.44 \tabularnewline
B & 10.33 & 9.07 & 8.31 & 6.3 \tabularnewline
C & 6.99 & 6.13 & 5.62 & 4.26 \tabularnewline
D & 8.2 & 7.2 & 6.6 & 5 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=186930&T=2

[TABLE]
[ROW][C]Tabulation of Expected Results[/C][/ROW]
[ROW][C]Depression
  x  Connected[/C][/ROW]
[ROW][C] [/C][C]A[/C][C]B[/C][C]C[/C][C]D[/C][/ROW]
[C]A[/C][C]15.49[/C][C]13.6[/C][C]12.47[/C][C]9.44[/C][/ROW]
[C]B[/C][C]10.33[/C][C]9.07[/C][C]8.31[/C][C]6.3[/C][/ROW]
[C]C[/C][C]6.99[/C][C]6.13[/C][C]5.62[/C][C]4.26[/C][/ROW]
[C]D[/C][C]8.2[/C][C]7.2[/C][C]6.6[/C][C]5[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=186930&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=186930&T=2

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Tabulation of Expected Results
Depression x Connected
ABCD
A15.4913.612.479.44
B10.339.078.316.3
C6.996.135.624.26
D8.27.26.65






Statistical Results
Pearson's Chi-squared test
Pearson Chi Square Statistic21.85
Degrees of Freedom9
P value0.01

\begin{tabular}{lllllllll}
\hline
Statistical Results \tabularnewline
Pearson's Chi-squared test \tabularnewline
Pearson Chi Square Statistic & 21.85 \tabularnewline
Degrees of Freedom & 9 \tabularnewline
P value & 0.01 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=186930&T=3

[TABLE]
[ROW][C]Statistical Results[/C][/ROW]
[ROW][C]Pearson's Chi-squared test[/C][/ROW]
[ROW][C]Pearson Chi Square Statistic[/C][C]21.85[/C][/ROW]
[ROW][C]Degrees of Freedom[/C][C]9[/C][/ROW]
[ROW][C]P value[/C][C]0.01[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=186930&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=186930&T=3

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Statistical Results
Pearson's Chi-squared test
Pearson Chi Square Statistic21.85
Degrees of Freedom9
P value0.01


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
par1 = 5 ; par2 = 2 ; par3 = Exact Pearson Chi-Squared by Simulation ;
Parameters (R input):
par1 = 6 ; par2 = 1 ; par3 = Pearson Chi-Squared ;
R code (references can be found in the software module):
library(vcd)
cat1 <- as.numeric(par1) #
cat2<- as.numeric(par2) #
simulate.p.value=FALSE
if (par3 == 'Exact Pearson Chi-Squared by Simulation') simulate.p.value=TRUE
x <- t(x)
(z <- array(unlist(x),dim=c(length(x[,1]),length(x[1,]))))
(table1 <- table(z[,cat1],z[,cat2]))
(V1<-dimnames(y)[[1]][cat1])
(V2<-dimnames(y)[[1]][cat2])
bitmap(file='pic1.png')
assoc(ftable(z[,cat1],z[,cat2],row.vars=1,dnn=c(V1,V2)),shade=T)
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tabulation of Results',ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste(V1,' x ', V2),ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1,TRUE)
for(nc in 1:ncol(table1)){
a<-table.element(a, colnames(table1)[nc], 1, TRUE)
}
a<-table.row.end(a)
for(nr in 1:nrow(table1) ){
a<-table.element(a, rownames(table1)[nr], 1, TRUE)
for(nc in 1:ncol(table1) ){
a<-table.element(a, table1[nr, nc], 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable.tab')
(cst<-chisq.test(table1, simulate.p.value=simulate.p.value) )
if (par3 == 'McNemar Chi-Squared') {
(cst <- mcnemar.test(table1))
}
if (par3=='Fisher Exact Test') {
(cst <- fisher.test(table1))
}
if ((par3 != 'McNemar Chi-Squared') & (par3 != 'Fisher Exact Test')) {
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tabulation of Expected Results',ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste(V1,' x ', V2),ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1,TRUE)
for(nc in 1:ncol(table1)){
a<-table.element(a, colnames(table1)[nc], 1, TRUE)
}
a<-table.row.end(a)
for(nr in 1:nrow(table1) ){
a<-table.element(a, rownames(table1)[nr], 1, TRUE)
for(nc in 1:ncol(table1) ){
a<-table.element(a, round(cst$expected[nr, nc], digits=2), 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
}
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Statistical Results',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, cst$method, 2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
if (par3=='Pearson Chi-Squared') a<-table.element(a, 'Pearson Chi Square Statistic', 1, TRUE)
if (par3=='Exact Pearson Chi-Squared by Simulation') a<-table.element(a, 'Exact Pearson Chi Square Statistic', 1, TRUE)
if (par3=='McNemar Chi-Squared') a<-table.element(a, 'McNemar Chi Square Statistic', 1, TRUE)
if (par3=='Fisher Exact Test') a<-table.element(a, 'Odds Ratio', 1, TRUE)
if (par3=='Fisher Exact Test') {
if ((ncol(table1) == 2) & (nrow(table1) == 2)) {
a<-table.element(a, round(cst$estimate, digits=2), 1,FALSE)
} else {
a<-table.element(a, '--', 1,FALSE)
}
} else {
a<-table.element(a, round(cst$statistic, digits=2), 1,FALSE)
}
a<-table.row.end(a)
if(!simulate.p.value){
if(par3!='Fisher Exact Test') {
a<-table.row.start(a)
a<-table.element(a, 'Degrees of Freedom', 1, TRUE)
a<-table.element(a, cst$parameter, 1,FALSE)
a<-table.row.end(a)
}
}
a<-table.row.start(a)
a<-table.element(a, 'P value', 1, TRUE)
a<-table.element(a, round(cst$p.value, digits=2), 1,FALSE)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')