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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_pairs.wasp
Title produced by softwareKendall tau Correlation Matrix
Date of computationFri, 22 Jan 2016 09:32:56 +0000
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2016/Jan/22/t14534551808p3yqkhb1ggmlad.htm/, Retrieved Tue, 07 May 2024 19:21:16 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=290799, Retrieved Tue, 07 May 2024 19:21:16 +0000
QR Codes:

Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact64

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-     [Kendall tau Correlation Matrix] [] [2016-01-22 09:21:15] [ddb383d93eee46d7cf1ad864071de83b]
-    D    [Kendall tau Correlation Matrix] [] [2016-01-22 09:32:56] [209097c909dba198a6919e2c6e4a1abb] [Current]
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Dataset

Dataseries X:
Download CSV
Histogram
Boxplots 
1 1 0 0 0 6 3.2
 3.2
 10.24
 3.3
0 0 1 0 1 7 0
 3
 10.89
 3.5
1 0 1 1 1 2 3
 3.7
 9
 2.7
0 0 1 0 1 11 0
 3.6
 12.25
 3.5
1 0 1 0 0 13 3.7
 3.8
 13.69
 3.4
0 1 0 0 0 3 0
 3.7
 7.29
 3.5
1 0 1 1 1 17 3.6
 2.8
 12.96
 3.8
0 0 1 0 1 10 0
 4.3
 12.25
 3.3
1 1 0 0 0 4 3.8
 3.6
 14.44
 3.6
0 0 1 0 0 12 0
 3.3
 11.56
 2.8

Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time0 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net
R Engine error message
Error in array(list(1, 1, 0, 0, 0, 6, 3.2, 3.2, 10.24, 3.3, 0, 0, 1, 0,  : 
  length of 'dimnames' [1] not equal to array extent
Execution halted


\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 0 seconds \tabularnewline
R Server & 'Gwilym Jenkins' @ jenkins.wessa.net \tabularnewline
R Engine error message & 
Error in array(list(1, 1, 0, 0, 0, 6, 3.2, 3.2, 10.24, 3.3, 0, 0, 1, 0,  : 
  length of 'dimnames' [1] not equal to array extent
Execution halted

 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=290799&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]0 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Gwilym Jenkins' @ jenkins.wessa.net[/C][/ROW]
[ROW][C]R Engine error message[/C][C]
Error in array(list(1, 1, 0, 0, 0, 6, 3.2, 3.2, 10.24, 3.3, 0, 0, 1, 0,  : 
  length of 'dimnames' [1] not equal to array extent
Execution halted

[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=290799&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=290799&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time0 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net
R Engine error message
Error in array(list(1, 1, 0, 0, 0, 6, 3.2, 3.2, 10.24, 3.3, 0, 0, 1, 0,  : 
  length of 'dimnames' [1] not equal to array extent
Execution halted


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
Parameters (R input):
par1 = pearson ;
R code (references can be found in the software module):
panel.tau <- function(x, y, digits=2, prefix='', cex.cor)
{
usr <- par('usr'); on.exit(par(usr))
par(usr = c(0, 1, 0, 1))
rr <- cor.test(x, y, method=par1)
r <- round(rr$p.value,2)
txt <- format(c(r, 0.123456789), digits=digits)[1]
txt <- paste(prefix, txt, sep='')
if(missing(cex.cor)) cex <- 0.5/strwidth(txt)
text(0.5, 0.5, txt, cex = cex)
}
panel.hist <- function(x, ...)
{
usr <- par('usr'); on.exit(par(usr))
par(usr = c(usr[1:2], 0, 1.5) )
h <- hist(x, plot = FALSE)
breaks <- h$breaks; nB <- length(breaks)
y <- h$counts; y <- y/max(y)
rect(breaks[-nB], 0, breaks[-1], y, col='grey', ...)
}
x <- na.omit(x)
y <- t(na.omit(t(y)))
bitmap(file='test1.png')
pairs(t(y),diag.panel=panel.hist, upper.panel=panel.smooth, lower.panel=panel.tau, main=main)
dev.off()
load(file='createtable')
n <- length(y[,1])
n
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Correlations for all pairs of data series (method=',par1,')',sep=''),n+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,' ',header=TRUE)
for (i in 1:n) {
a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE)
}
a<-table.row.end(a)
for (i in 1:n) {
a<-table.row.start(a)
a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE)
for (j in 1:n) {
r <- cor.test(y[i,],y[j,],method=par1)
a<-table.element(a,round(r$estimate,3))
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable.tab')
ncorrs <- (n*n -n)/2
mycorrs <- array(0, dim=c(10,3))
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Correlations for all pairs of data series with p-values',4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'pair',1,TRUE)
a<-table.element(a,'Pearson r',1,TRUE)
a<-table.element(a,'Spearman rho',1,TRUE)
a<-table.element(a,'Kendall tau',1,TRUE)
a<-table.row.end(a)
cor.test(y[1,],y[2,],method=par1)
for (i in 1:(n-1))
{
for (j in (i+1):n)
{
a<-table.row.start(a)
dum <- paste(dimnames(t(x))[[2]][i],';',dimnames(t(x))[[2]][j],sep='')
a<-table.element(a,dum,header=TRUE)
rp <- cor.test(y[i,],y[j,],method='pearson')
a<-table.element(a,round(rp$estimate,4))
rs <- cor.test(y[i,],y[j,],method='spearman')
a<-table.element(a,round(rs$estimate,4))
rk <- cor.test(y[i,],y[j,],method='kendall')
a<-table.element(a,round(rk$estimate,4))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=T)
a<-table.element(a,paste('(',round(rp$p.value,4),')',sep=''))
a<-table.element(a,paste('(',round(rs$p.value,4),')',sep=''))
a<-table.element(a,paste('(',round(rk$p.value,4),')',sep=''))
a<-table.row.end(a)
for (iii in 1:10) {
iiid100 <- iii / 100
if (rp$p.value < iiid100) mycorrs[iii, 1] = mycorrs[iii, 1] + 1
if (rs$p.value < iiid100) mycorrs[iii, 2] = mycorrs[iii, 2] + 1
if (rk$p.value < iiid100) mycorrs[iii, 3] = mycorrs[iii, 3] + 1
}
}
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Meta Analysis of Correlation Tests',4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Number of significant by total number of Correlations',4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Type I error',1,TRUE)
a<-table.element(a,'Pearson r',1,TRUE)
a<-table.element(a,'Spearman rho',1,TRUE)
a<-table.element(a,'Kendall tau',1,TRUE)
a<-table.row.end(a)
for (iii in 1:10) {
iiid100 <- iii / 100
a<-table.row.start(a)
a<-table.element(a,round(iiid100,2),header=T)
a<-table.element(a,round(mycorrs[iii,1]/ncorrs,2))
a<-table.element(a,round(mycorrs[iii,2]/ncorrs,2))
a<-table.element(a,round(mycorrs[iii,3]/ncorrs,2))
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')